RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CHORDC1Q9UHD1 332 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TMCC3Q9ULS5 477 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ZBTB1Q9Y2K1 713 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ZFP37Q9Y6Q3 630 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CYP3A7-CYP3A51PA0A087WV96 503 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PMS2P5A8MQ11 134 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 RTCAO00442 366 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TNPO2O14787 897 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 HTATSF1O43719 755 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TBX10O75333 385 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TSPAN9O75954 239 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 GOSR1O95249 250 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CYP3A7P24462 503 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ABCD1P33897 745 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 EIF2DP41214 584 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PAFAH1B1P43034 410 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 MCM2P49736 904 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CDK7P50613 346 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CYP2J2P51589 502 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 IRX1P78414 480 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SF3A3Q12874 501 aaKnown RBP eCLIP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 RPS6KA2Q15349 733 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NFIL3Q16649 462 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LRRC24Q50LG9 513 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SETMARQ53H47 684 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ARL13AQ5H913 290 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 BMP2KLQ5H9B9 411 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TATDN1Q6P1N9 297 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 DCLRE1AQ6PJP8 1040 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 KLHL24Q6TFL4 600 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SYNE3Q6ZMZ3 975 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SLFN11Q7Z7L1 901 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CNTROBQ8N137 903 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 C17orf53Q8N3J3 647 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 METTL27Q8N6F8 245 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TMEM217Q8N7C4 229 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ZNF441Q8N8Z8 693 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 HCAR2Q8TDS4 363 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CPT1BQ92523 772 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SECISBP2LQ93073 1101 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ELP4Q96EB1 424 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 CCDC34Q96HJ3 373 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 NR1H4Q96RI1 486 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LBHD1Q9BQE6 289 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 FTOQ9C0B1 505 aaKnown RBP eCLIP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 ANKRD2Q9GZV1 360 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PDCL3Q9H2J4 239 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PLEKHA2Q9HB19 425 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PCDHB16Q9NRJ7 776 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 TAS2R10Q9NYW0 307 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 SLC25A10Q9UBX3 287 aaPredicted RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 PA2G4Q9UQ80 394 aaKnown RBP2.1□□□□□ -2.07
XRCC4-204ENST00000509268 RCE1Q9Y256 329 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 KCNK7Q9Y2U2 307 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 LYVE1Q9Y5Y7 322 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 FAM169AQ9Y6X4 670 aa2.1□□□□□ -2.07
XRCC4-204ENST00000509268 RUSC2Q8N2Y8 1516 aa2.09□□□□□ -2.07
XRCC4-204ENST00000509268 PNMA6EA0A0J9YXQ4 647 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 A0A1W2PQ09 198 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SLC38A8A6NNN8 435 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 KDM4EB2RXH2 506 aaPredicted RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 PEX12O00623 359 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 HNRNPRO43390 633 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 TBCAO75347 108 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 ENTPD3O75355 529 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SRSF10O75494 262 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 HEXIM1O94992 359 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CER1O95813 267 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 MT-ND3P03897 115 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SRCP12931 536 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SCG2P13521 617 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 PSMB10P40306 273 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 RAD23AP54725 363 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 UBXN2AP68543 259 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 TMF1P82094 1093 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 RBP5P82980 135 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CAMK1Q14012 370 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 IRF3Q14653 427 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 MED22Q15528 200 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 ADIPOQQ15848 244 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 NAA35Q5VZE5 725 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 GPR139Q6DWJ6 353 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 FAAP20Q6NZ36 180 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 MSANTD2Q6P1R3 559 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 MTFR2Q6P444 385 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 NFE4Q86UQ8 179 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 TTC30AQ86WT1 665 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SFR1Q86XK3 245 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 LINC00346Q8IVM7 164 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CCDC170Q8IYT3 715 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 RBFAQ8N0V3 343 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 TAGAPQ8N103 731 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 ETNPPLQ8TBG4 499 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 HMGB4Q8WW32 186 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 CCDC47Q96A33 483 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 GRAMD1AQ96CP6 724 aa2.09□□□□□ -2.08
XRCC4-204ENST00000509268 RBM17Q96I25 401 aaKnown RBP2.09□□□□□ -2.08
XRCC4-204ENST00000509268 SPAG5Q96R06 1193 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms