RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	LMAN2L	Q9H0V9	348 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	C11orf49	Q9H6J7	331 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	NOD2	Q9HC29	1040 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	RALY	Q9UKM9	306 aa	Known RBP	4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	TNN	Q9UQP3	1299 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	GDA	Q9Y2T3	454 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	AK9	Q5TCS8	1911 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	MYH13	Q9UKX3	1938 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	CEP250	Q9BV73	2442 aa		4.26	□□□□□ -1.73
NFKB1-208	ENST00000509165	DOCK2	Q92608	1830 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	DNAH14	Q0VDD8	3507 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	EP300	Q09472	2414 aa	Predicted RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165		A0A096LPK6	155 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	HBP1	O60381	514 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	BBOX1	O75936	387 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	IL1A	P01583	271 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	GPR12	P47775	334 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	AMT	P48728	403 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	CENPA	P49450	140 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	NUDT6	P53370	316 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	ADORA2A-AS1	P86434	159 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	MYBPC2	Q14324	1141 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	ANKRD45	Q5TZF3	282 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	MON1B	Q7L1V2	547 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	MCPH1	Q8NEM0	835 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	MED30	Q96HR3	178 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	ZBED3	Q96IU2	234 aa	Predicted RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM84B	Q96KN1	310 aa	Predicted RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	GFM1	Q96RP9	751 aa	Known RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	HERPUD2	Q9BSE4	406 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	SLCO5A1	Q9H2Y9	848 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	STN1	Q9H668	368 aa	Known RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	TTC12	Q9H892	705 aa	Predicted RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	SUFU	Q9UMX1	484 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	PCDHAC2	Q9Y5I4	1007 aa		4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	SRPRB	Q9Y5M8	271 aa	Known RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	ASH1L	Q9NR48	2969 aa	Known RBP	4.25	□□□□□ -1.73
NFKB1-208	ENST00000509165	CNTNAP2	Q9UHC6	1331 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	IGHV4-28	A0A0C4DH34	117 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	PI4K2B	G5E9Z4	385 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	EYA2	O00167	538 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	IPO8	O15397	1037 aa	Known RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	ZNF12	P17014	697 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	NAGA	P17050	411 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	CTPS1	P17812	591 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TTK	P33981	857 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	PDLIM4	P50479	330 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	PAPOLA	P51003	745 aa	Known RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	RRP1	P56182	461 aa	Known RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	RPS8	P62241	208 aa	Known RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TRAF2	Q12933	501 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	ASIC2	Q16515	512 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	CCDC152	Q4G0S7	254 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	NCAPH2	Q6IBW4	605 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	BBS12	Q6ZW61	710 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	PATL1	Q86TB9	770 aa	Known RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TBC1D16	Q8TBP0	767 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TMEM170A	Q8WVE7	144 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TRIM63	Q969Q1	353 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	REEP2	Q9BRK0	252 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	PYM1	Q9BRP8	204 aa	Known RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TMX4	Q9H1E5	349 aa	Predicted RBP	4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	DEFB129	Q9H1M3	183 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	SLC45A1	Q9Y2W3	748 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	MED23	Q9ULK4	1368 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	PLXNA3	P51805	1871 aa		4.24	□□□□□ -1.73
NFKB1-208	ENST00000509165	TECTA	O75443	2155 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	MED19	A0JLT2	244 aa	Predicted RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	SH2D7	A6NKC9	451 aa	Predicted RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	ASAP2	O43150	1006 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	KLK10	O43240	276 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	CIAO1	O76071	339 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	PPP1R3D	O95685	299 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	PRSS2	P07478	247 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	CHRM4	P08173	479 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	FGF3	P11487	239 aa	Predicted RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	CKMT1A	P12532	417 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	ITGB8	P26012	769 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	ARSF	P54793	590 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	BNC1	Q01954	994 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM27E3	Q08E93	113 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	KIF5A	Q12840	1032 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	CTTN	Q14247	550 aa	Known RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	LPIN1	Q14693	890 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	ANKRD1	Q15327	319 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	MAP3K21	Q5TCX8	1036 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	C18orf65	Q6ZTR6	163 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	ATG9A	Q7Z3C6	839 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	ZMIZ2	Q8NF64	920 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	RASSF8	Q8NHQ8	419 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	RAB40A	Q8WXH6	277 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	HSPH1	Q92598	858 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	SH3KBP1	Q96B97	665 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	PHF7	Q9BWX1	381 aa	Predicted RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	BICC1	Q9H694	974 aa	Known RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	CLK4	Q9HAZ1	481 aa	Known RBP	4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	AGO1	Q9UL18	857 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms