RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PGRMC2O15173 223 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TNFSF14O43557 240 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 HBP1O60381 514 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 NDUFS3O75489 264 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 IPO7O95373 1038 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 PGM3O95394 542 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CER1O95813 267 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 RB1P06400 928 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TPOP07202 933 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ALDOCP09972 364 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CHRNB2P17787 502 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 MAPK4P31152 587 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CPOXP36551 454 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 HADHAP40939 763 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC15A1P46059 708 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 GABRB2P47870 512 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 NRIP1P48552 1158 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 AMPHP49418 695 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 HSD17B4P51659 736 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CLCN5P51795 746 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 PMS2P54278 862 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 OAZ1P54368 228 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 UFM1P61960 85 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TFAP4Q01664 338 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 DSC1Q08554 894 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 NIPAL4Q0D2K0 466 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ILF3Q12906 894 aaKnown RBP eCLIP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 BAATQ14032 418 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 HNF4GQ14541 408 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 E2F5Q15329 346 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 PKN2Q16513 984 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 AAK1Q2M2I8 961 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF718Q3SXZ3 478 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ALG10Q5BKT4 473 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ALG10BQ5I7T1 473 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TOR1AIP1Q5JTV8 583 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TEX35Q5T0J7 233 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARMC4Q5T2S8 1044 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 OTUD1Q5VV17 481 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADALQ6DHV7 355 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 RAB12Q6IQ22 244 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM88Q6PEY1 159 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SPSB3Q6PJ21 355 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 DCLRE1AQ6PJP8 1040 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADCK2Q7Z695 626 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC9B2Q86UD5 537 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARHGAP12Q8IWW6 846 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF619Q8N2I2 560 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 KIF18AQ8NI77 898 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 BICD2Q8TD16 824 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SGCDQ92629 289 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TAF15Q92804 592 aaKnown RBP eCLIP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SNX21Q969T3 373 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 INTS12Q96CB8 462 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 MASTLQ96GX5 879 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ERO1AQ96HE7 468 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF419Q96HQ0 510 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADAD1Q96M93 576 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 C16orf45Q96MC5 204 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 GCNAQ96QF7 691 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 DESI2Q9BSY9 194 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SPXQ9BT56 116 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC25A23Q9BV35 468 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 NPLQ9BXD5 320 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 POLDIP3Q9BY77 421 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 FRMD8Q9BZ67 464 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 MMADHCQ9H3L0 296 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 MROH8Q9H579 483 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 DDX31Q9H8H2 851 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 PLEKHA2Q9HB19 425 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF304Q9HCX3 659 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 IL1RAPL2Q9NP60 686 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 DDX43Q9NXZ2 648 aaKnown RBP2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 IL1RAPL1Q9NZN1 696 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 CACNG4Q9UBN1 327 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLCO3A1Q9UIG8 710 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SH3BGRL2Q9UJC5 107 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 DUSP12Q9UNI6 340 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 TNFSF13BQ9Y275 285 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 MMP24Q9Y5R2 645 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 POMT1Q9Y6A1 747 aa2.44□□□□□ -2.02
DEPDC1B-204ENST00000509006 SPAG9O60271 1321 aaKnown RBP2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 ABCC9O60706 1549 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 CYP3A7-CYP3A51PA0A087WV96 503 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 TRAV34A0A0B4J273 112 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 A0A0B4J293 547 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM237BA0A1B0GVD1 139 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 TRBC2A0A5B9 178 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 PLOD2O00469 737 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF263O14978 683 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC16A5O15375 505 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 ASAP2O43150 1006 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC7A4O43246 635 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 MSI1O43347 362 aaKnown RBP2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 TXNL1O43396 289 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADAM20O43506 726 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 FMO6PO60774 539 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 KERAO60938 352 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 SEC22BO75396 215 aa2.43□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC22A3O75751 556 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms