RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SMIM18P0DKX4 95 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 RGRP47804 291 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 GLRBP48167 497 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 CLCN5P51795 746 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 NR1H2P55055 460 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 INHBCP55103 352 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 PSME3P61289 254 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 CYP4F8P98187 520 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 MS4A2Q01362 244 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 GALNT3Q14435 633 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 SLC5A9Q2M3M2 681 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 CXorf57Q6NSI4 855 aaKnown RBP11□□□□□ -0.65
SH3RF1-203ENST00000508685 B3GNT6Q6ZMB0 384 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 RNF135Q8IUD6 432 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 MFSD6LQ8IWD5 586 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 KLHL23Q8NBE8 558 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 OR13J1Q8NGT2 312 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 ADAMTS19Q8TE59 1207 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 ELMO2Q96JJ3 720 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 NSMCE3Q96MG7 304 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 ASB2Q96Q27 587 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 RANBP9Q96S59 729 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 SLC25A23Q9BV35 468 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 COPS7BQ9H9Q2 264 aaPredicted RBP11□□□□□ -0.65
SH3RF1-203ENST00000508685 MEAF6Q9HAF1 191 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 IL23AQ9NPF7 189 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 DMTF1Q9Y222 760 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 PLXNA4Q9HCM2 1894 aa11□□□□□ -0.65
SH3RF1-203ENST00000508685 HEATR9A2RTY3 570 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 GPC4O75487 556 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PAPSS2O95340 614 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 C1RP00736 705 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 RHOCP08134 193 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PIRTP0C851 137 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 HOXB8P17481 243 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 AVPR1AP37288 418 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 GRIA2P42262 883 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ACADVLP49748 655 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PFKPQ01813 784 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 RHDQ02161 417 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF460Q14592 562 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ACAP2Q15057 778 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 NEPROQ6NW34 567 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 GAREM2Q75VX8 874 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 SATL1Q86VE3 508 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 TMEM102Q8N9M5 508 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 TRPC4APQ8TEL6 797 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 HIC2Q96JB3 615 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 FBXO5Q9UKT4 447 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 TMCO1Q9UM00 188 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 AP4S1Q9Y587 144 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 KCTD3Q9Y597 815 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 CPQQ9Y646 472 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 LOC285095A0A1B0GVY8 99 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 UBDO15205 165 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 GREM1O60565 184 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 IPO13O94829 963 aaKnown RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 TFAP2AP05549 437 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 LTA4HP09960 611 aaKnown RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 CTSAP10619 480 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 HDCP19113 662 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 GABRR2P28476 465 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 MAGEA10P43363 369 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PPP3CCP48454 512 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 RPS6KA3P51812 740 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PKNOX1P55347 436 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 OXCT1P55809 520 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 TAS2R39P59534 338 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF177Q13360 481 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 SLC14A2Q15849 920 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 SPATS1Q496A3 300 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 SAMD4BQ5PRF9 694 aaKnown RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 RNF219Q5W0B1 726 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 FAM45BPQ6NSW5 357 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 LINGO4Q6UY18 593 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 HS6ST3Q8IZP7 471 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 FIBCD1Q8N539 461 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 FAM45AQ8TCE6 357 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 HEXDCQ8WVB3 486 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PBXIP1Q96AQ6 731 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 PKP2Q99959 881 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 MGME1Q9BQP7 344 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 MUC3BQ9H195 1237 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 POMKQ9H5K3 350 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ADA2Q9NZK5 511 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ATXN10Q9UBB4 475 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 UBA2Q9UBT2 640 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 G3BP2Q9UN86 482 aaKnown RBP10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 OBSL1O75147 1896 aa10.99□□□□□ -0.65
SH3RF1-203ENST00000508685 ILVBLA1L0T0 632 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 DYTNA2CJ06 578 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 LCHNA4D1U4 455 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms