RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 LYSMD1Q96S90 227 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 NUDT22Q9BRQ3 303 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 RIOK2Q9BVS4 552 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 LCMT1Q9UIC8 334 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 DNPEPQ9ULA0 475 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 TMEM98Q9Y2Y6 226 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 PLEKHM1Q9Y4G2 1056 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 PCYT1BQ9Y5K3 369 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
HMGCS1-205ENST00000508319 FLNBO75369 2602 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 SPTA1P02549 2419 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 BSNQ9UPA5 3926 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 PRAMEF33A0A0G2JMD5 474 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 SSU72P8A0A1W2PR75 194 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 RHPN2P1A8MT19 583 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 KCNK1O00180 336 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 EFSO43281 561 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 PRAMEF10O60809 474 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 CLDN7O95471 211 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 PYGLP06737 847 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 TPM3P06753 285 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 MMP2P08253 660 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 CA4P22748 312 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 KDELR1P24390 212 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 ACTR1BP42025 376 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 GPR3P46089 330 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 OR1D5P58170 312 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 ACTR1AP61163 376 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 IFI35P80217 286 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 CFHR1Q03591 330 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 PPIDQ08752 370 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 ZBTB17Q13105 803 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 SRSF6Q13247 344 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 AMZ1Q400G9 498 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 PYCR3Q53H96 274 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 PHF19Q5T6S3 580 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 HENMT1Q5T8I9 393 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 CCDC81Q6ZN84 652 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 MARK2Q7KZI7 788 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 RAVER1Q8IY67 606 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 OR8K1Q8NGG5 319 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 WDR24Q96S15 920 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 CCNL2Q96S94 520 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 CMKLR1Q99788 373 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 HAUS2Q9NVX0 235 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 FOXJ2Q9P0K8 574 aa12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 OAS3Q9Y6K5 1087 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 ASH1LQ9NR48 2969 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-205ENST00000508319 C1orf232A0A0U1RR37 186 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 LRRD1A4D1F6 860 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 ZNF487B1APH4 448 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 C9orf172C9J069 976 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 PPM1DO15297 605 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 INPP4BO15327 924 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 LIPCP11150 499 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CD1CP29017 333 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 ALDH4A1P30038 563 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CSF2RBP32927 897 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CD86P42081 329 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 LRP8Q14114 963 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 TRIM14Q14142 442 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 MESDQ14696 234 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 TGIF1Q15583 401 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CLPPQ16740 277 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 QPCTQ16769 361 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 FAM182AQ5T1J6 154 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 SLC9A4Q6AI14 798 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 PIM3Q86V86 326 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 GALNT13Q8IUC8 556 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CCNYQ8ND76 341 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 ZNF830Q96NB3 372 aaPredicted RBP12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 RNF157Q96PX1 679 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 DEF6Q9H4E7 631 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 ABHD10Q9NUJ1 306 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 VPS18Q9P253 973 aa12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 CNOT6Q9ULM6 557 aaKnown RBP12.92□□□□□ -0.34
HMGCS1-205ENST00000508319 IGHV1OR21-1A0A087WYE8 117 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 IGHV5-10-1A0A0J9YXX1 117 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 FADS2P1A8MWK0 482 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 AKR1B10O60218 316 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 DNAJC6O75061 913 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 MFAP3LO75121 409 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 MTA2O94776 668 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 EML2O95834 649 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 JCHAINP01591 159 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 ATP1A1P05023 1023 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 FASLGP48023 281 aa12.91□□□□□ -0.34
HMGCS1-205ENST00000508319 SPINT3P49223 89 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms