RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 MAK16Q9BXY0 300 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 RANBP17Q9H2T7 1088 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SLC32A1Q9H598 525 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 PCDHB16Q9NRJ7 776 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 CYSLTR2Q9NS75 346 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 IL1RAPL1Q9NZN1 696 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 CFDP1Q9UEE9 299 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 PCDHGB4Q9UN71 923 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 MAGED1Q9Y5V3 778 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 SNX9Q9Y5X1 595 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 LYVE1Q9Y5Y7 322 aa4.23□□□□□ -1.73
TRAPPC13-209ENST00000508304 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 FAM170AA1A519 330 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 FGF17O60258 216 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 RGS11O94810 467 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 DNTTP04053 509 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 RNF224P0DH78 156 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 PORP16435 677 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 NOVP48745 357 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 NLRP5P59047 1200 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 NEDD9Q14511 834 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 ALDH1L2Q3SY69 923 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF772Q68DY9 489 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 PXKQ7Z7A4 578 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 EPHX4Q8IUS5 362 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 CIARTQ8N365 385 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 SCFD2Q8WU76 684 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 LBHD1Q9BQE6 289 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 RSPH9Q9H1X1 276 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 TTYH1Q9H313 450 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF334Q9HCZ1 680 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 BEX4Q9NWD9 120 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 BABAM1Q9NWV8 329 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 HCFC1R1Q9NWW0 138 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 KCND2Q9NZV8 630 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 NFKBIL1Q9UBC1 381 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 LIMA1Q9UHB6 759 aaKnown RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 CORO1CQ9ULV4 474 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 SMAD5-AS1Q9Y6J3 95 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 PIAS3Q9Y6X2 628 aa4.22□□□□□ -1.73
TRAPPC13-209ENST00000508304 ATXN2Q99700 1313 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-209ENST00000508304 IGKV3D-15A0A087WSY6 115 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 TEX13CA0A0J9YWL9 993 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 GAGE10A6NGK3 116 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 VILLO15195 856 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 DKC1O60832 514 aaKnown RBP eCLIP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 CSH1P0DML2 217 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 CSH2P0DML3 217 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 FGF5P12034 268 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 LAMP2P13473 410 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 KCNA5P22460 613 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 MCCP23508 829 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 GPTP24298 496 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 EPHA8P29322 1005 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 UFM1P61960 85 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 CREB5Q02930 508 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZBTB17Q13105 803 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 GPR139Q6DWJ6 353 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 SLC30A6Q6NXT4 461 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM122CQ6P4D5 195 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 INO80CQ6PI98 192 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 C19orf48Q6RUI8 117 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 MOB3CQ70IA8 216 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZC3HC1Q86WB0 502 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 PARP16Q8N5Y8 322 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 LSM14AQ8ND56 463 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 GJC3Q8NFK1 279 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 ARRDC2Q8TBH0 407 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 POMGNT1Q8WZA1 660 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 ANKRD9Q96BM1 317 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 NSUN4Q96CB9 384 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM120BQ96EK7 910 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 RADILQ96JH8 1075 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 EYA3Q99504 573 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 BAG1Q99933 345 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 RBM4Q9BWF3 364 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 ITPAQ9BY32 194 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 USP44Q9H0E7 712 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 SH3GLB2Q9NR46 395 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 SMARCAL1Q9NZC9 954 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 EHD2Q9NZN4 543 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 HCN3Q9P1Z3 774 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 SARDHQ9UL12 918 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 CARD8Q9Y2G2 431 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 SNX8Q9Y5X2 465 aa4.21□□□□□ -1.74
TRAPPC13-209ENST00000508304 GOLGA6L10A0A0M3HER8 536 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM90A7PA6NKC0 464 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 TTC36A6NLP5 189 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM90A22PA8MWA6 464 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM90A12PA8MX19 464 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM90A23PA8MXZ1 464 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 MYO1GB0I1T2 1018 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 EIF3CLB5ME19 914 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 J3KR12 359 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 HSPA12AO43301 675 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 COX7A2P14406 83 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 SRD5A1P18405 259 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 CHATP28329 748 aa4.2□□□□□ -1.74
TRAPPC13-209ENST00000508304 GCH1P30793 250 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms