RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FLRT2O43155 660 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ZW10O43264 779 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 LDB2O43679 373 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 GFRA3O60609 400 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 USP1O94782 785 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 AP2A2O94973 939 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 SEC31AO94979 1220 aaKnown RBP8.42□□□□□ -1.06
PDGFC-205ENST00000506880 RASGRP1O95267 797 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 AGTP01019 485 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CSF2P04141 144 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 THEGLP0DJG4 465 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ALPPL2P10696 532 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ITGALP20701 1170 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 IVDP26440 423 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 IGFALSP35858 605 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 PTGIRP43119 386 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 GPR1P46091 355 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 KCNJ1P48048 391 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ADARP55265 1226 aaKnown RBP8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ARL4CP56559 192 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CUL1Q13616 776 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 FGL2Q14314 439 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 GALNT3Q14435 633 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ITIH4Q14624 930 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 IRF4Q15306 451 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ELOCQ15369 112 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 POM121L1PQ3SYA9 428 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 SEL1L3Q68CR1 1132 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 C8orf74Q6P047 294 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 AFTPHQ6ULP2 937 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 PACS1Q6VY07 963 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 GCNT7Q6ZNI0 430 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 Q6ZVL8 140 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 LYSMD3Q7Z3D4 306 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 SNX20Q7Z614 316 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 LRRC6Q86X45 466 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CACUL1Q86Y37 369 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 RELL1Q8IUW5 271 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ZCCHC9Q8N567 271 aaKnown RBP8.42□□□□□ -1.06
PDGFC-205ENST00000506880 DDHD1Q8NEL9 900 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CPT1BQ92523 772 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 PKNOX2Q96KN3 472 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CAPZA3Q96KX2 299 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 BMFQ96LC9 184 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 CEP41Q9BYV8 373 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ABCG8Q9H221 673 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 ARRDC1-AS1Q9H2J1 176 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 TRIM39Q9HCM9 518 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 TMEM9BQ9NQ34 198 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 FAM114A2Q9NRY5 505 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 SOX13Q9UN79 622 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 SLC17A4Q9Y2C5 497 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 TCAF1Q9Y4C2 921 aa8.42□□□□□ -1.06
PDGFC-205ENST00000506880 TDRD6O60522 2096 aaKnown RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TRBV5-4A0A0C4DH59 114 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GLYATL1P3A0A0U1RQE8 302 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 A0A1B0GTQ1 180 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 OR5K4A6NMS3 321 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 EFCAB8A8MWE9 144 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 E7ESA3 106 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 H3BMM5 538 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GJB3O75712 270 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CLDN7O95471 211 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 POLBP06746 335 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 C1SP09871 688 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 BPIP17213 487 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GM2AP17900 193 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 VCLP18206 1134 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TGM1P22735 817 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 MCM3P25205 808 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 ETV3P41162 512 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GRK6P43250 576 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TTPAP49638 278 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CDK3Q00526 305 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 PPARDQ03181 441 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CACNG1Q06432 222 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GRIK2Q13002 908 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 SRSF5Q13243 272 aaKnown RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 ILKQ13418 452 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 NFATC2Q13469 925 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 HIF1AQ16665 826 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 CLPPQ16740 277 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TSTD2Q5T7W7 516 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 DUPD1Q68J44 220 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 RAET1GQ6H3X3 334 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 KIAA0930Q6ICG6 404 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 MRNIPQ6NTE8 343 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 HIBCHQ6NVY1 386 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 Q6ZSR6 202 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 KIAA0408Q6ZU52 694 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 HSD11B1LQ7Z5J1 315 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 PTAR1Q7Z6K3 402 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 TMEM135Q86UB9 458 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 BEND7Q8N7W2 519 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-205ENST00000506880 FAM181AQ8N9Y4 354 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 OR56A4Q8NGH8 313 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 GPR150Q8NGU9 434 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 WDR48Q8TAF3 677 aa8.41□□□□□ -1.06
PDGFC-205ENST00000506880 BLOC1S5Q8TDH9 187 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms