RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 DNAJC6O75061 913 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 TBX10O75333 385 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ATP5HO75947 161 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 SRP72O76094 671 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 RHOBTB1O94844 696 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 DLDP09622 509 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ALPIP09923 528 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 SBK3P0C264 359 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CCDC166P0CW27 439 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CYP2A6P11509 494 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 PKMP14618 531 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CTPS1P17812 591 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 RPS3P23396 243 aaKnown RBP eCLIP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 GKP32189 559 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 HNF1BP35680 557 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 SERPINB5P36952 375 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 GMPRP36959 345 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 VIPR2P41587 438 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 SKIV2L2P42285 1042 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CCNHP51946 323 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 HK2P52789 917 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ADARP55265 1226 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CDKN2DP55273 166 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 DNAJB13P59910 316 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ST8SIA6P61647 398 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 PFKPQ01813 784 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 OVGP1Q12889 678 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ITGA9Q13797 1035 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 PUS10Q3MIT2 529 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 GPR33Q49SQ1 333 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ZRANB3Q5FWF4 1079 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 TECRLQ5HYJ1 363 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ATAT1Q5SQI0 421 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 LIPMQ5VYY2 423 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ZDHHC20Q5W0Z9 365 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CES4AQ5XG92 561 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 TMEM215Q68D42 235 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 UGT3A1Q6NUS8 523 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 BRAT1Q6PJG6 821 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 GDPD4Q6W3E5 623 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ZCCHC23Q6ZST2 131 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 EP400NLQ6ZTU2 488 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 USP45Q70EL2 814 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 TAS2R42Q7RTR8 314 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 LYSMD3Q7Z3D4 306 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 SNX20Q7Z614 316 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 NKAPQ8N5F7 415 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 NAT16Q8N8M0 369 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 OR6K2Q8NGY2 324 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 RFWD2Q8NHY2 731 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 PIWIL2Q8TC59 973 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 FRS2Q8WU20 508 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 EID2BQ96D98 161 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 RSPRY1Q96DX4 576 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 THOC1Q96FV9 657 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 MRGPRX3Q96LB0 322 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 RMDN2Q96LZ7 410 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 LRRC37BQ96QE4 947 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 SMIM14Q96QK8 99 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 MCCC1Q96RQ3 725 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 FAM83CQ9BQN1 747 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 GATA5Q9BWX5 397 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 IGFLR1Q9H665 355 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ZFP14Q9HCL3 533 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 BPIFA1Q9NP55 256 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 ABCF3Q9NUQ8 709 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 TAS2R13Q9NYV9 303 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 CPSF2Q9P2I0 782 aaKnown RBP8.02□□□□□ -1.13
COL4A5-208ENST00000505728 DCTN4Q9UJW0 460 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 DNAJC16Q9Y2G8 782 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 PCDHB1Q9Y5F3 818 aa8.02□□□□□ -1.13
COL4A5-208ENST00000505728 TRBV5-4A0A0C4DH59 114 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 C1orf232A0A0U1RR37 186 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 TSPAN11A1L157 253 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-208ENST00000505728 PRMT5O14744 637 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-208ENST00000505728 MBTPS2O43462 519 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 ITM2AO43736 263 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 DLX3O60479 287 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 NPHS1O60500 1241 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 TULP3O75386 442 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 VPS26AO75436 327 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 UBOX5O94941 541 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 FSBPO95073 299 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 CLDN7O95471 211 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 HSPA4LO95757 839 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 SLC4A1P02730 911 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 ESR1P03372 595 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 ZNF7P17097 686 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-208ENST00000505728 ITGALP20701 1170 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 FMO4P31512 558 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 SPAM1P38567 509 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 SCTRP47872 440 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 ATP6V0D1P61421 351 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 TIAL1Q01085 375 aaKnown RBP eCLIP8.01□□□□□ -1.13
COL4A5-208ENST00000505728 ACTN3Q08043 901 aaPredicted RBP8.01□□□□□ -1.13
COL4A5-208ENST00000505728 BNIP1Q12981 228 aa8.01□□□□□ -1.13
COL4A5-208ENST00000505728 PDAP1Q13442 181 aaKnown RBP8.01□□□□□ -1.13
COL4A5-208ENST00000505728 RCN2Q14257 317 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms