RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 LDB1Q86U70 411 aaPredicted RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ANKFN1Q8N957 763 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 SNX31Q8N9S9 440 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ARRDC2Q8TBH0 407 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 HDAC10Q969S8 669 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 PAWRQ96IZ0 340 aaKnown RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 HIC2Q96JB3 615 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 FBRSL1Q9HCM7 1045 aaKnown RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 TMEM248Q9NWD8 314 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 CNOT6Q9ULM6 557 aaKnown RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 BBIP1A8MTZ0 92 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ADAM12O43184 909 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 TBX18O95935 607 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ATXN1LP0C7T5 689 aaKnown RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 CD1DP15813 335 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ATF6P18850 670 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 DSC2Q02487 901 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ILF2Q12905 390 aaKnown RBP16.9■□□□□ 0.3
LIN54-204ENST00000505397 LAMB3Q13751 1172 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 SIRPB2Q5JXA9 342 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ARHGAP22Q7Z5H3 698 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 RETREG3Q86VR2 466 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 PBXIP1Q96AQ6 731 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 BTN2A3PQ96KV6 586 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 OCEL1Q9H607 264 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 ABCD2Q9UBJ2 740 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 DNAJC15Q9Y5T4 150 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 SNX13Q9Y5W8 968 aa16.9■□□□□ 0.3
LIN54-204ENST00000505397 KIAA0100Q14667 2235 aaKnown RBP16.89■□□□□ 0.3
LIN54-204ENST00000505397 A0A1B0GTW7 788 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 SLC12A8A0AV02 714 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 SOD2P04179 222 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 BMP2P12643 396 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 SUOXP51687 545 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 SH3BP2P78314 561 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.29
LIN54-204ENST00000505397 EML3Q32P44 896 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 CYP2R1Q6VVX0 501 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 AMIGO2Q86SJ2 522 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 PIM3Q86V86 326 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 DHFR2Q86XF0 187 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ZUFSPQ96AP4 578 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 KLHL5Q96PQ7 755 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ASB2Q96Q27 587 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 AKTIPQ9H8T0 292 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 MAP10Q9P2G4 905 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 CEPT1Q9Y6K0 416 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 DOCK4Q8N1I0 1966 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ATP6AP2A0A1C7CYW4 349 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ARHGAP10A1A4S6 786 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 TLR5O60602 858 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ATP6AP2O75787 350 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 HMBSP08397 361 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 SLC7A2P52569 658 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 LRRC26Q2I0M4 334 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 TMEM259Q4ZIN3 620 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 PPP4R4Q6NUP7 873 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ZNF549Q6P9A3 640 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 PHYKPLQ8IUZ5 450 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 RNF168Q8IYW5 571 aaPredicted RBP16.89■□□□□ 0.29
LIN54-204ENST00000505397 GPR150Q8NGU9 434 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 CDK5RAP1Q96SZ6 601 aaKnown RBP16.89■□□□□ 0.29
LIN54-204ENST00000505397 EFHD1Q9BUP0 239 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 VN1R3Q9BXE9 311 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ZYG11BQ9C0D3 744 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 ATXN10Q9UBB4 475 aa16.89■□□□□ 0.29
LIN54-204ENST00000505397 IGLV3-10A0A075B6K4 115 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 CCL22O00626 93 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 EFCAB14O75071 495 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 H6PDO95479 791 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 EFEMP2O95967 443 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 ZNF23P17027 643 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 TSPAN8P19075 237 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 PGBD5Q8N414 524 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 PCYOX1LQ8NBM8 494 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 PEX13Q92968 403 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 ANKRD60Q9BZ19 345 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 NACA2Q9H009 215 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 NOL11Q9H8H0 719 aaKnown RBP16.88■□□□□ 0.29
LIN54-204ENST00000505397 OLAHQ9NV23 265 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 DUS2Q9NX74 493 aaKnown RBP16.88■□□□□ 0.29
LIN54-204ENST00000505397 AFF4Q9UHB7 1163 aaKnown RBP16.88■□□□□ 0.29
LIN54-204ENST00000505397 COL4A6Q14031 1691 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 OR51F1A6NGY5 319 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 H3BNH8 94 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 CDK14O94921 469 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 TIMP1P01033 207 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 CSF2RAP15509 400 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 ALDH3B2P48448 385 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 KPNA1P52294 538 aaPredicted RBP16.88■□□□□ 0.29
LIN54-204ENST00000505397 DEFB103AP81534 67 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 ITKQ08881 620 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 ALFQ53S48 1182 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 NHSL2Q5HYW2 709 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 MS4A13Q5J8X5 152 aa16.88■□□□□ 0.29
LIN54-204ENST00000505397 TFAP2DQ7Z6R9 452 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms