RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NDUFS1P28331 727 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CCND3P30281 292 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 PRCPP42785 496 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ATP5OP48047 213 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 COPB1P53618 953 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ADARP55265 1226 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 C21orf58P58505 322 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TAS2R40P59535 323 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 WDR5P61964 334 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 OCA2Q04671 838 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CXCL9Q07325 125 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 HSPB3Q12988 150 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 IFT88Q13099 833 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 NAE1Q13564 534 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CUL2Q13617 745 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TSTA3Q13630 321 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 NFYCQ13952 458 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 GAMTQ14353 236 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC39A14Q15043 492 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CEBPEQ15744 281 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZKSCAN8Q15776 578 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TCTN1Q2MV58 587 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 VWC2Q2TAL6 325 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 KCTD21Q4G0X4 260 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 IQCCQ4KMZ1 466 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 AARDQ4LEZ3 155 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 FASTKD1Q53R41 847 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 LRRC73Q5JTD7 316 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CES4AQ5XG92 561 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 RAET1GQ6H3X3 334 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 OR6B2Q6IFH4 312 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ARHGAP11AQ6P4F7 1023 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 PSRC1Q6PGN9 363 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 KIRREL2Q6UWL6 708 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 MPZL3Q6UWV2 235 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 DHRS13Q6UX07 377 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 MACC1Q6ZN28 852 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMEM182Q6ZP80 229 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 MAVSQ7Z434 540 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TAF8Q7Z7C8 310 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CTAGE6Q86UF2 777 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 DTX2Q86UW9 622 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMEM173Q86WV6 379 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 KLBQ86Z14 1044 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 SYT12Q8IV01 421 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 FOXP4Q8IVH2 680 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 MCEMP1Q8IX19 187 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CTAGE4Q8IX94 777 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ELMOD2Q8IZ81 293 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 BANPQ8N9N5 519 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 Q8NA96 180 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CAGE1Q8TC20 777 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 RNF139Q8WU17 664 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CASP10Q92851 521 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TTC25Q96NG3 672 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 LRRC37BQ96QE4 947 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 DDOQ99489 341 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 SEPT5Q99719 369 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 MTMR12Q9C0I1 747 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZNF350Q9GZX5 532 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TKTL2Q9H0I9 626 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 DDX47Q9H0S4 455 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 RAB17Q9H0T7 212 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 KCNK15Q9H427 330 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 GPN1Q9HCN4 374 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 KLHL1Q9NR64 748 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TPSG1Q9NRR2 321 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 DNAJC11Q9NVH1 559 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 RBM28Q9NW13 759 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 FAM118AQ9NWS6 357 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 LARSQ9P2J5 1176 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 COPG2Q9UBF2 871 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 ATP6V1HQ9UI12 483 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 AMFRQ9UKV5 643 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CAB39Q9Y376 341 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMED5Q9Y3A6 229 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 TEX264Q9Y6I9 313 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 NPHP3Q7Z494 1330 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 A0A087WV48 116 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 A0A0G2JPF8 293 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 CPED1A4D0V7 1026 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 HNRNPCL3B7ZW38 293 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 BOLA2-SMG1P6H3BVE0 249 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 E2F3O00716 465 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 ATP2A1O14983 1001 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 SMAD9O15198 467 aaKnown RBP3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 TEX28O15482 410 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 KIF5CO60282 957 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 ATP6V1G1O75348 118 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 MTX2O75431 263 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 MED24O75448 989 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 JRKO75564 520 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 RPS6KA4O75676 772 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 PGLSO95336 258 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 AK1P00568 194 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 PDGFBP01127 241 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 RHOP08100 348 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 C8orf89P0DMQ9 161 aa3.64□□□□□ -1.83
HMGB1P22-201ENST00000505315 HNRNPCL4P0DMR1 293 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms