RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MRPL18Q9H0U6 180 aaKnown RBP5.24□□□□□ -1.57
NIPBL-204ENST00000504430 DNAJC17Q9NVM6 304 aaKnown RBP5.24□□□□□ -1.57
NIPBL-204ENST00000504430 THAP1Q9NVV9 213 aa5.24□□□□□ -1.57
NIPBL-204ENST00000504430 RAB20Q9NX57 234 aa5.24□□□□□ -1.57
NIPBL-204ENST00000504430 AMACRQ9UHK6 382 aa5.24□□□□□ -1.57
NIPBL-204ENST00000504430 CDH7Q9ULB5 785 aa5.24□□□□□ -1.57
NIPBL-204ENST00000504430 TAF6LQ9Y6J9 622 aa5.24□□□□□ -1.57
NIPBL-204ENST00000504430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 A0A0B4J293 547 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 A0A1B0GWJ7 208 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 RSPH10B2B2RC85 870 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PSPNO60542 156 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 RHBDL1O75783 438 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 CIB2O75838 187 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 ITGB1P05556 798 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 C8AP07357 584 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 GALTP07902 379 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 RSPH10BP0C881 870 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 AREGP15514 252 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 HK1P19367 917 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PCMT1P22061 227 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 FDXRP22570 491 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PRKACBP22694 351 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PRKAR1BP31321 381 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 KCNQ1P51787 676 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PGDP52209 483 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 C15orf39Q6ZRI6 1047 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 Q6ZS46 218 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 MSANTD1Q6ZTZ1 278 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 SLC46A3Q7Z3Q1 461 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 DCP2Q8IU60 420 aaKnown RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 TMEFF1Q8IYR6 380 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 RNF169Q8NCN4 708 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PSPC1Q8WXF1 523 aaKnown RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 SNX19Q92543 992 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 NPIPB3Q92617 1050 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 LRRC45Q96CN5 670 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 RNF31Q96EP0 1072 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 DLGAP4Q9Y2H0 992 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 SLC27A6Q9Y2P4 619 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 EDDM13A0A1B0GTR0 161 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 KLHL2O95198 593 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 SLC16A8O95907 504 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PABPC4LP0CB38 370 aaKnown RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 UGT1A6P19224 532 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 CCR4P51679 360 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 MTTPP55157 894 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 OXCT1P55809 520 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 SRP54P61011 504 aaKnown RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 RIN1Q13671 783 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 CR1LQ2VPA4 569 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 KDM7AQ6ZMT4 941 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 TRILQ7L0X0 811 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 ZNF572Q7Z3I7 529 aaPredicted RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 CLYBLQ8N0X4 340 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 BHLHE23Q8NDY6 225 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 CNOT9Q92600 299 aaKnown RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 NKD2Q969F2 451 aaPredicted RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 PGM2Q96G03 612 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 HES6Q96HZ4 224 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 KIFC3Q9BVG8 833 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 S1PR5Q9H228 398 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 FZD8Q9H461 694 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 MKKSQ9NPJ1 570 aaPredicted RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 TRPM5Q9NZQ8 1165 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 OGFRQ9NZT2 677 aa5.23□□□□□ -1.57
NIPBL-204ENST00000504430 GMPR2Q9P2T1 348 aaKnown RBP5.23□□□□□ -1.57
NIPBL-204ENST00000504430 C15orf38-AP3S2A0A0A6YYH1 394 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 OR2W5A6NFC9 320 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ANXA2P2A6NMY6 339 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 NDUFS8O00217 210 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 AVILO75366 819 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SLC43A1O75387 559 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 STC2O76061 302 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 OR8G3PP0DMU2 310 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 POU2F1P14859 743 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 KRT4P19013 534 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CPN2P22792 545 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 RYKP34925 604 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 STARP49675 285 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SLC26A2P50443 739 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PRMT2P55345 433 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ACTR3P61158 418 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 RPL15P61313 204 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 GPC5P78333 572 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 NUCB2P80303 420 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TAP1Q03518 808 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 MVPQ14764 893 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 GPAT3Q53EU6 434 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 FAM76BQ5HYJ3 339 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TMEM211Q6ICI0 200 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 OR7E24Q6IFN5 339 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 KIAA1161Q6NSJ0 714 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 BEND4Q6ZU67 534 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PARS2Q7L3T8 475 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SYVN1Q86TM6 617 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ZNF410Q86VK4 478 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ZNF366Q8N895 744 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D15Q8TC07 691 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 C11orf24Q96F05 449 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms