RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TMPRSS6Q8IU80 811 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 LSMEM2Q8N112 164 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 TXNDC5Q8NBS9 432 aaKnown RBP11.56□□□□□ -0.56
USP46-204ENST00000503060 MAPK15Q8TD08 544 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 PDCD6IPQ8WUM4 868 aaKnown RBP11.56□□□□□ -0.56
USP46-204ENST00000503060 MCUR1Q96AQ8 359 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 SGF29Q96ES7 293 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 TDRD1Q9BXT4 1180 aaKnown RBP11.56□□□□□ -0.56
USP46-204ENST00000503060 GPAMQ9HCL2 828 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 L3MBTL1Q9Y468 752 aa11.56□□□□□ -0.56
USP46-204ENST00000503060 PLXNA4Q9HCM2 1894 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 MATN2O00339 956 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 NPHS1O60500 1241 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 GREM1O60565 184 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 SNAP91O60641 907 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 EFCAB14O75071 495 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 PEX11AO75192 247 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ZMPSTE24O75844 475 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CRTAMO95727 393 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 OLFM2O95897 454 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CD160O95971 181 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 C1RP00736 705 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 PRLP01236 227 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CCDC166P0CW27 439 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 GM2AP17900 193 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 OGNP20774 298 aaKnown RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 ZNF140P52738 457 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 HK2P52789 917 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CDKN2DP55273 166 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 DNAJB13P59910 316 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 SEMA3AQ14563 771 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 TXNDC8Q6A555 127 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 FAM45BPQ6NSW5 357 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 KLC3Q6P597 504 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ABRAXAS1Q6UWZ7 409 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 GPR65Q8IYL9 337 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CCDC116Q8IYX3 515 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CARNMT1Q8N4J0 409 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ARL14EPQ8N8R7 260 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 HJURPQ8NCD3 748 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 RBM15BQ8NDT2 890 aaKnown RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 OR4L1Q8NH43 312 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 FBXO27Q8NI29 283 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 FAM45AQ8TCE6 357 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 AGR3Q8TD06 166 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 RMDN1Q96DB5 314 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CDKN2AIPNLQ96HQ2 116 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ZNF333Q96JL9 665 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 FAM161BQ96MY7 647 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CATSPERZQ9NTU4 200 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 NLE1Q9NVX2 485 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 RAI2Q9Y5P3 530 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ARPC4-TTLL3A0A0A6YYG9 625 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 H0Y626 953 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 GFRA2O00451 464 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 HDAC3O15379 428 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 TMCC1O94876 653 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 RBP1P09455 135 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 SPATA31D3P0C874 917 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ACRP10323 421 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 FDXRP22570 491 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 MZF1P28698 734 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 PPM1AP35813 382 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 PGM1P36871 562 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 SEPHS1P49903 392 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 PABPC1LQ4VXU2 614 aaKnown RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 FSCBQ5H9T9 825 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 LINGO4Q6UY18 593 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 Q6ZNB5 142 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 SPATA31D4Q6ZUB0 917 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CCNYL1Q8N7R7 359 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 FAM81AQ8TBF8 368 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 TRIM43Q96BQ3 446 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 YME1L1Q96TA2 773 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 POMKQ9H5K3 350 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 C11orf49Q9H6J7 331 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 IL20Q9NYY1 176 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 ZDHHC2Q9UIJ5 367 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CORO1CQ9ULV4 474 aaPredicted RBP11.55□□□□□ -0.56
USP46-204ENST00000503060 CRYL1Q9Y2S2 319 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 CPQQ9Y646 472 aa11.55□□□□□ -0.56
USP46-204ENST00000503060 GRID2O43424 1007 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 LUC7L3O95232 432 aaKnown RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 PDHA1P08559 390 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 HOXB8P17481 243 aaPredicted RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 HDCP19113 662 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ENDOUP21128 410 aaKnown RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 ATP6V1E1P36543 226 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 HSD17B2P37059 387 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 SLC26A3P40879 764 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ZXDBP98169 803 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 CREMQ03060 361 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ACAP2Q15057 778 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TAF1AQ15573 450 aaPredicted RBP11.54□□□□□ -0.56
USP46-204ENST00000503060 SEL1L3Q68CR1 1132 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 ZNF549Q6P9A3 640 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 TMEM207Q6UWW9 146 aa11.54□□□□□ -0.56
USP46-204ENST00000503060 C1orf122Q6ZSJ8 110 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms