RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.34
RACK1-202ENST00000502548 ZNF711Q9Y462 761 aa12.9□□□□□ -0.34
RACK1-202ENST00000502548 CPED1A4D0V7 1026 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 AURKAO14965 403 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 AGTP01019 485 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 HMGCLP35914 325 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 CHRNA4P43681 627 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 DCDC1P59894 354 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 PARP6Q2NL67 630 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 SLC13A5Q86YT5 568 aaPredicted RBP12.89□□□□□ -0.35
RACK1-202ENST00000502548 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 ARL10Q8N8L6 244 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 FAM71DQ8N9W8 422 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 GPR26Q8NDV2 337 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 GPBAR1Q8TDU6 330 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 NAT6Q93015 286 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 ZSCAN5AQ9BUG6 496 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 FSD1LQ9BXM9 530 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
RACK1-202ENST00000502548 GSDMCQ9BYG8 508 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 ABCG4Q9H172 646 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 CARD9Q9H257 536 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 GULP1Q9UBP9 304 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 PADI4Q9UM07 663 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 SUFUQ9UMX1 484 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
RACK1-202ENST00000502548 SPO11Q9Y5K1 396 aa12.89□□□□□ -0.35
RACK1-202ENST00000502548 FAM149AA5PLN7 773 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 FADS2P1A8MWK0 482 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 C1QTNF9BB2RNN3 333 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 INPP4BO15327 924 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 OPA1O60313 960 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 ASMTLO95671 621 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 FGF1P05230 155 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 C1QTNF9P0C862 333 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 BPIP17213 487 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 PSMB4P28070 264 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 ADRA1AP35348 466 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 GNPDA1P46926 289 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 INSM1Q01101 510 aaPredicted RBP12.88□□□□□ -0.35
RACK1-202ENST00000502548 ILF3Q12906 894 aaKnown RBP eCLIP12.88□□□□□ -0.351e-11■■□□□ 12.2
RACK1-202ENST00000502548 PEX6Q13608 980 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 TCEA2Q15560 299 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 ZDHHC20Q5W0Z9 365 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 PDPK2PQ6A1A2 396 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 GUSBP11Q6P575 273 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 DOK6Q6PKX4 331 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 UNQ6494/PRO21346Q6UXR6 183 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 EFL1Q7Z2Z2 1120 aaKnown RBP12.88□□□□□ -0.35
RACK1-202ENST00000502548 TRAM1L1Q8N609 369 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 OR6C4Q8NGE1 309 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 CCL4L1Q8NHW4 92 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 IFI44Q8TCB0 444 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 DTX3LQ8TDB6 740 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 ANP32BQ92688 251 aaKnown RBP12.88□□□□□ -0.35
RACK1-202ENST00000502548 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 SPATA16Q9BXB7 569 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 DPEP2Q9H4A9 486 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.88□□□□□ -0.352e-25■□□□□ 10
RACK1-202ENST00000502548 VPS18Q9P253 973 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
RACK1-202ENST00000502548 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
RACK1-202ENST00000502548 PPFIA2O75334 1257 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 SLC25A14O95258 325 aaPredicted RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 MT-CO3P00414 261 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 ATP1A1P05023 1023 aaKnown RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 PROS1P07225 676 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 ADCY8P40145 1251 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 TARDBPQ13148 414 aaKnown RBP eCLIP12.87□□□□□ -0.35
RACK1-202ENST00000502548 PYCR3Q53H96 274 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 ALS2CLQ60I27 953 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 TRIM74Q86UV6 250 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 NRROSQ86YC3 692 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 MARCH9Q86YJ5 346 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 KLHDC8BQ8IXV7 354 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 TTC30BQ8N4P2 665 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 GPR156Q8NFN8 814 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 MAPK15Q8TD08 544 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 BLOC1S5Q8TDH9 187 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 LRRC45Q96CN5 670 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 PLEKHG4BQ96PX9 1271 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 FICDQ9BVA6 458 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 TLR10Q9BXR5 811 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 SUDS3Q9H7L9 328 aaPredicted RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 RMI1Q9H9A7 625 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 TRIM39Q9HCM9 518 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 SPATS2LQ9NUQ6 558 aaKnown RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 IL17CQ9P0M4 197 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 SIRPGQ9P1W8 387 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 ZNHIT2Q9UHR6 403 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 FEZ2Q9UHY8 353 aaPredicted RBP12.87□□□□□ -0.35
RACK1-202ENST00000502548 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
RACK1-202ENST00000502548 TMEM8BA6NDV4 472 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms