RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 LIN9Q5TKA1 542 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 STEAP3Q658P3 488 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 RAP1GAP2Q684P5 730 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 GTF2IRD2BQ6EKJ0 949 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TMPRSS9Q7Z410 1059 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 GTF2IRD2Q86UP8 949 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ADGRF2Q8IZF7 708 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DSELQ8IZU8 1212 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PCDH20Q8N6Y1 951 aaKnown RBP5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 OR13F1Q8NGS4 319 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 UBA3Q8TBC4 463 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DPF3Q92784 378 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 HDAC11Q96DB2 347 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 PTPN18Q99952 460 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 GDF15Q99988 308 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 DGCR6LQ9BY27 220 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ANKRD60Q9BZ19 345 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 WWP1Q9H0M0 922 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 TRPV6Q9H1D0 765 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 NTN4Q9HB63 628 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ZDHHC4Q9NPG8 344 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 HPS4Q9NQG7 708 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SLC35C2Q9NQQ7 365 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 ENOPH1Q9UHY7 261 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 SQORQ9Y6N5 450 aa5.78□□□□□ -1.48
SOX2-OT-218ENST00000498731 MCM3APO60318 1980 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SYNJ2BP-COX16A0A087WUM0 186 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 LRRC72A6NJI9 287 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 TK2O00142 265 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 NEMP1O14524 444 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 TSPAN4O14817 238 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 TM9SF1O15321 606 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 DYRK3O43781 588 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 DLGAP3O95886 979 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PGK1P00558 417 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 C1QAP02745 245 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 STAG3L1P0CL83 205 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 RPL17P18621 184 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 HAAOP46952 286 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 RGS7P49802 495 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PLA2G16P53816 162 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 ABCE1P61221 599 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CUL2Q13617 745 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 TRIM25Q14258 630 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 GRIK4Q16099 956 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CDO1Q16878 200 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 GNASQ5JWF2 1037 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CLVS2Q5SYC1 327 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 TEDDM1Q5T9Z0 273 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 ANKRD34AQ69YU3 496 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SCYL2Q6P3W7 929 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 MAMDC4Q6UXC1 1216 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZNF438Q7Z4V0 828 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 NUDCD3Q8IVD9 361 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZC3H3Q8IXZ2 948 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CBR4Q8N4T8 237 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CHAC2Q8WUX2 184 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 FBXW5Q969U6 566 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 VPS33AQ96AX1 596 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SDCCAG3Q96C92 435 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CRELD1Q96HD1 420 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SLC45A3Q96JT2 553 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 HSFY1Q96LI6 401 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 C7orf26Q96N11 449 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 APOBEC3GQ9HC16 384 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PDLIM7Q9NR12 457 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 DDX28Q9NUL7 540 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 COX16Q9P0S2 106 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 AASSQ9UDR5 926 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 DPP7Q9UHL4 492 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PNMA8BQ9ULN7 279 aaPredicted RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PIN4Q9Y237 131 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 MIF4GDA9UHW6 222 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SLC9A3R1O14745 358 aaPredicted RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 NUPL2O15504 423 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 TBX1O43435 398 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 GPC4O75487 556 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 RFPL1O75677 317 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 ABLIM3O94929 683 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PAHP00439 452 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 GOT2P00505 430 aaKnown RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PRLP01236 227 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 NFICP08651 508 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 HTR1AP08908 422 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 PIK3R1P27986 724 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 CD40LGP29965 261 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 FMO1Q01740 532 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SP3Q02447 781 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 UBE3AQ05086 875 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 IRF3Q14653 427 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 RFTN1Q14699 578 aaPredicted RBP5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 KIAA0319Q5VV43 1072 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 SULT1C3Q6IMI6 304 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 MZT2BQ6NZ67 158 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 FOXR2Q6PJQ5 311 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 MPZL3Q6UWV2 235 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 ZNF600Q6ZNG1 722 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 GALNT12Q8IXK2 581 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 FAM71DQ8N9W8 422 aa5.77□□□□□ -1.49
SOX2-OT-218ENST00000498731 LMO3Q8TAP4 145 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms