RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CCL11P51671 97 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 GFERP55789 205 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 SH3BP2P78314 561 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 MAN2A1Q16706 1144 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 KLHDC7AQ5VTJ3 777 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CPZQ66K79 652 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CRYBG3Q68DQ2 2970 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 DPY19L2P1Q6NXN4 242 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 WDR74Q6RFH5 385 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 MAMDC2Q7Z304 686 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 GALNT13Q8IUC8 556 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 SMIM14Q96QK8 99 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 OR6C1Q96RD1 312 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 NDST4Q9H3R1 872 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 SEPT11Q9NVA2 429 aaKnown RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 PDP2Q9P2J9 529 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 CNOT8Q9UFF9 292 aaKnown RBP9.06□□□□□ -0.96
CCDC171-209ENST00000498725 LNPEPQ9UIQ6 1025 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 KCNK6Q9Y257 313 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 SLC17A4Q9Y2C5 497 aa9.06□□□□□ -0.96
CCDC171-209ENST00000498725 ESPL1Q14674 2120 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 MED13Q9UHV7 2174 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 NPIPB15A6NHN6 443 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 F8VZ95 297 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 EEF2KO00418 725 aaKnown RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 FGF10O15520 208 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CREG1O75629 220 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 RASSF9O75901 435 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 NDUFA10O95299 355 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 ATP1A1P05023 1023 aaKnown RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CYP2A6P11509 494 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 UCHL3P15374 230 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 TYRP1P17643 537 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 LHCGRP22888 699 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 FASLGP48023 281 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 PGDP52209 483 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 NDST2P52849 883 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 PMS2P54278 862 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 RPS18P62269 152 aaKnown RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 FMO1Q01740 532 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CAMK4Q16566 473 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CA9Q16790 459 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 VWA3BQ502W6 1294 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 PYCR3Q53H96 274 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 TP53INP2Q8IXH6 220 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 SFRP1Q8N474 314 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CT55Q8WUE5 264 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 SCAMP4Q969E2 229 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 MCEEQ96PE7 176 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 TGM7Q96PF1 710 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 RUFY1Q96T51 708 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 AGAP2Q99490 1192 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 TUBGCP2Q9BSJ2 902 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 SLC25A23Q9BV35 468 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 ABCG8Q9H221 673 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 VPS16Q9H269 839 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 DHX35Q9H5Z1 703 aaKnown RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 STN1Q9H668 368 aaKnown RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 ADAM22Q9P0K1 906 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 TBC1D29Q9UFV1 150 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 NOCTQ9UK39 431 aaKnown RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 MAP4K5Q9Y4K4 846 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 PCYT1BQ9Y5K3 369 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-209ENST00000498725 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CREBBPQ92793 2442 aa9.05□□□□□ -0.96
CCDC171-209ENST00000498725 CELSR2Q9HCU4 2923 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 ANKRD62A6NC57 917 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 ARGFXA6NJG6 315 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 TCP11X1B4DZS4 312 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 GADD45BO75293 160 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 CYP1A1P04798 512 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 CCNYL3P0C7X3 344 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 ACP5P13686 325 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 TNFRSF8P28908 595 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 NSFP46459 744 aaKnown RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 MAXP61244 160 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 AP1S1P61966 158 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 RPL7AP62424 266 aaKnown RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 CDR2Q01850 454 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 SLC10A7Q0GE19 358 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 TRAF2Q12933 501 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 PTP4A2Q12974 167 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 DNASE1L3Q13609 305 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 ZNF235Q14590 738 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 LBRQ14739 615 aaKnown RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 INPP5JQ15735 1006 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 MIIPQ5JXC2 388 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 DNAJC24Q6P3W2 148 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 FAM199XQ6PEV8 388 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 SLC9B2Q86UD5 537 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 ARHGAP12Q8IWW6 846 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 ELOA2Q8IYF1 753 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-209ENST00000498725 AP2M1Q96CW1 435 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 PCDHB18PQ96TA0 734 aa9.04□□□□□ -0.96
CCDC171-209ENST00000498725 NAA15Q9BXJ9 866 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms