RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
CCDC58-207ENST00000498466 TAB2Q9NYJ8 693 aa13.85□□□□□ -0.19
CCDC58-207ENST00000498466 TCRBV5S1A1TA0A578 114 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 EML2O95834 649 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 GNLYP22749 145 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 F8A1P23610 371 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 DPTQ07507 201 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 MAP7Q14244 749 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 PTPRRQ15256 657 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 TCP11X2Q5H9J9 407 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 ADAMTSL4Q6UY14 1074 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 USP45Q70EL2 814 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 SH3KBP1Q96B97 665 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 AP2M1Q96CW1 435 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 RNF31Q96EP0 1072 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 SCRN2Q96FV2 425 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 ULBP3Q9BZM4 244 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 SARS2Q9NP81 518 aaKnown RBP13.84□□□□□ -0.19
CCDC58-207ENST00000498466 SAMSN1Q9NSI8 373 aaKnown RBP13.84□□□□□ -0.19
CCDC58-207ENST00000498466 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 POLHQ9Y253 713 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 NOTCH2Q04721 2471 aa13.84□□□□□ -0.19
CCDC58-207ENST00000498466 SPTAN1Q13813 2472 aaKnown RBP13.84□□□□□ -0.19
CCDC58-207ENST00000498466 TTLL8A6PVC2 850 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 EIF3CLB5ME19 914 aaKnown RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 EPHB6O15197 1021 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 KATNA1O75449 491 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 RFPL1O75677 317 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 ASMTLO95671 621 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 SOD1P00441 154 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 CTPS1P17812 591 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 TNFAIP3P21580 790 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 EEF1GP26641 437 aaKnown RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 OGDHQ02218 1023 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 FOXM1Q08050 763 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 TRAF2Q12933 501 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 DPCR1Q3MIW9 517 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 PPP6R3Q5H9R7 873 aaPredicted RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 ERMARDQ5T6L9 678 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 CAPRIN2Q6IMN6 1127 aaKnown RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 C6orf15Q6UXA7 325 aaPredicted RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 RFLNAQ6ZTI6 216 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 TECPR1Q7Z6L1 1165 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 SSC4DQ8WTU2 575 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 ZNF599Q96NL3 588 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 NUDCD1Q96RS6 583 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 KCTD15Q96SI1 283 aaPredicted RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 EIF3CQ99613 913 aaKnown RBP13.83□□□□□ -0.2
CCDC58-207ENST00000498466 ABCG8Q9H221 673 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 NOD2Q9HC29 1040 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 PCSK1NQ9UHG2 260 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 ZNHIT2Q9UHR6 403 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 DACH1Q9UI36 760 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 UNC79Q9P2D8 2635 aa13.83□□□□□ -0.2
CCDC58-207ENST00000498466 A0A0U1RQS6 177 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 ENO4A6NNW6 628 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 INPP4BO15327 924 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 FURINP09958 794 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 ZNF28P17035 718 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 PSMA2P25787 234 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 HSPA9P38646 679 aaKnown RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 EPHA4P54764 986 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 MAXP61244 160 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 ARMC12Q5T9G4 340 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 LRRC66Q68CR7 880 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 IYDQ6PHW0 289 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 SLC9B2Q86UD5 537 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 PLXDC1Q8IUK5 500 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 BBS5Q8N3I7 341 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 PGBD5Q8N414 524 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 GALNT11Q8NCW6 608 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 CPT1CQ8TCG5 803 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 SCAMP4Q969E2 229 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 STAMBPL1Q96FJ0 436 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 MCCC1Q96RQ3 725 aaPredicted RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 SNRNP25Q9BV90 132 aaKnown RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 SIDT1Q9NXL6 827 aaKnown RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 CNOT8Q9UFF9 292 aaKnown RBP13.82□□□□□ -0.2
CCDC58-207ENST00000498466 TBC1D29Q9UFV1 150 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 PRKAB1Q9Y478 270 aa13.82□□□□□ -0.2
CCDC58-207ENST00000498466 CDC14CA4D256 554 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 SNX2O60749 519 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 PGLSO95336 258 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 PYGLP06737 847 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 PMS2P54278 862 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 BECN1Q14457 450 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 TMEM135Q86UB9 458 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 NDUFAF2Q8N183 169 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 GALNT6Q8NCL4 622 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 EXD1Q8NHP7 514 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 PEBP4Q96S96 227 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 AGAP2Q99490 1192 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 AGPAT1Q99943 283 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
CCDC58-207ENST00000498466 HERPUD2Q9BSE4 406 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms