RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 TOMM20Q15388 145 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 NAB2Q15742 525 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 ADIPOQQ15848 244 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 ASIC2Q16515 512 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 MEA1Q16626 185 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 KIF19Q2TAC6 998 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SOWAHCQ53LP3 525 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 GKAP1Q5VSY0 366 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 RGMBQ6NW40 437 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 FAM122CQ6P4D5 195 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 PRSS57Q6UWY2 283 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 GLDNQ6ZMI3 551 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 CCNI2Q6ZMN8 369 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SEPT14Q6ZU15 432 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 WDTC1Q8N5D0 677 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SMRP1Q8NCR6 262 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 OR2AK2Q8NG84 335 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SCFD2Q8WU76 684 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 ORAI1Q96D31 301 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 GRAMD2BQ96HH9 432 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 ZNF385AQ96PM9 386 aaKnown RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SEPT5Q99719 369 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SH2D4AQ9H788 454 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SYNCQ9H7C4 482 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SEBOXQ9HB31 216 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-215ENST00000498284 PCDH9Q9HC56 1237 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 MCM9Q9NXL9 1143 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 ZNF224Q9NZL3 707 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 MALT1Q9UDY8 824 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 SIX4Q9UIU6 781 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 VPS28Q9UK41 221 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 PCDHGB1Q9Y5G3 927 aa4.4□□□□□ -1.71
PTPRK-215ENST00000498284 FRMD3A2A2Y4 597 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 K7ENM7 598 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 MID1O15344 667 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 AFPP02771 609 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 LINC00271P0C7V0 271 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 TGFB3P10600 412 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 ALOX12P18054 663 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 UBA1P22314 1058 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 TM4SF1P30408 202 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 HADHAP40939 763 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 PIK3CAP42336 1068 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 FOXM1Q08050 763 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 TNFAIP1Q13829 316 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 CRYMQ14894 314 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 IZUMO4Q1ZYL8 232 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 RILPL1Q5EBL4 403 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 C9orf57Q5W0N0 161 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 FRG2Q64ET8 278 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 CAPRIN2Q6IMN6 1127 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 RNF168Q8IYW5 571 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 BEST3Q8N1M1 668 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 PCDH20Q8N6Y1 951 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 LMO3Q8TAP4 145 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 BICD1Q96G01 975 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 NAF1Q96HR8 494 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 CMKLR1Q99788 373 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 CWC15Q9P013 229 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 ADD3Q9UEY8 706 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 ZNF215Q9UL58 517 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 ACSL5Q9ULC5 683 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 R3HDM2Q9Y2K5 976 aaKnown RBP4.39□□□□□ -1.71
PTPRK-215ENST00000498284 RABGAP1Q9Y3P9 1069 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 LOXL2Q9Y4K0 774 aa4.39□□□□□ -1.71
PTPRK-215ENST00000498284 MAGEA13PA6NCF6 341 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 A8MZ25 164 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 M0QZ24 198 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 SPINT2O43291 252 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 DDNO94850 711 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-215ENST00000498284 HOXD13P35453 343 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 PRCPP42785 496 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 GALCP54803 685 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 TAS2R40P59535 323 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 TFAP4Q01664 338 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 MC1RQ01726 317 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 ZSCAN23Q3MJ62 389 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 KCNT1Q5JUK3 1230 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 DCST1Q5T197 706 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 LRIF1Q5T3J3 769 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 RUSC1-AS1Q66K80 236 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 ZNF280DQ6N043 979 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 TMEM154Q6P9G4 183 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.38□□□□□ -1.714e-8■■■■□ 26
PTPRK-215ENST00000498284 ZNF34Q8IZ26 560 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 SRBD1Q8N5C6 995 aaKnown RBP4.38□□□□□ -1.71
PTPRK-215ENST00000498284 SPATA22Q8NHS9 363 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 APBB2Q92870 758 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 RHBDF1Q96CC6 855 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 NEUROD6Q96NK8 337 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 DUX5Q96PT3 197 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 NCAPGQ9BPX3 1015 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 NUDT16L1Q9BRJ7 211 aaKnown RBP4.38□□□□□ -1.71
PTPRK-215ENST00000498284 C1QTNF4Q9BXJ3 329 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 SLCO5A1Q9H2Y9 848 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 SMARCAD1Q9H4L7 1026 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 DDX31Q9H8H2 851 aaKnown RBP4.38□□□□□ -1.71
PTPRK-215ENST00000498284 OR14J1Q9UGF5 321 aa4.38□□□□□ -1.71
PTPRK-215ENST00000498284 ZNF580Q9UK33 172 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms