RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CHERPQ8IWX8 916 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 BEST3Q8N1M1 668 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 C17orf53Q8N3J3 647 aaPredicted RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 CSNK2A3Q8NEV1 391 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 OR8K5Q8NH50 307 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 ELP5Q8TE02 316 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 APBB2Q92870 758 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 GRAMD2BQ96HH9 432 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 MAK16Q9BXY0 300 aaKnown RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 SEZ6LQ9BYH1 1024 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 SPRY4Q9C004 299 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 SEBOXQ9HB31 216 aaPredicted RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 UBA2Q9UBT2 640 aaPredicted RBP4.79□□□□□ -1.64
VPS36-206ENST00000497149 OR14J1Q9UGF5 321 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 CLIC4Q9Y696 253 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 EVPLQ92817 2033 aa4.79□□□□□ -1.64
VPS36-206ENST00000497149 M0QZ24 198 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 AHCYL1O43865 530 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 ACTN1P12814 892 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 SRCP12931 536 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 ANXA7P20073 488 aaKnown RBP4.78□□□□□ -1.64
VPS36-206ENST00000497149 RRM1P23921 792 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 GCH1P30793 250 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 HTR6P50406 440 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
VPS36-206ENST00000497149 ECT2LQ008S8 904 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 LTBQ06643 244 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 LRMPQ12912 555 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 NFATC4Q14934 902 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 HLFQ16534 295 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 TAGAPQ8N103 731 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 TMED6Q8WW62 240 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 ORAI1Q96D31 301 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 SCMH1Q96GD3 660 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 CALML4Q96GE6 196 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 EGLN2Q96KS0 407 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 CSF3RQ99062 836 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 NUDT16L1Q9BRJ7 211 aaKnown RBP4.78□□□□□ -1.64
VPS36-206ENST00000497149 TMEM204Q9BSN7 226 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 MAGIXQ9H6Y5 334 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 COPG2Q9UBF2 871 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 FBXW11Q9UKB1 542 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 PCDHGB4Q9UN71 923 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 CMAHPQ9Y471 501 aa4.78□□□□□ -1.64
VPS36-206ENST00000497149 GOLGA6L9A6NEM1 432 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 H3BQ06 376 aaPredicted RBP4.77□□□□□ -1.65
VPS36-206ENST00000497149 INSIG1O15503 277 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 SPINT2O43291 252 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 GPC4O75487 556 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 TPPPO94811 219 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 ICAM1P05362 532 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 PON1P27169 355 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 FOXG1P55316 489 aaPredicted RBP4.77□□□□□ -1.65
VPS36-206ENST00000497149 FOXM1Q08050 763 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 CDC16Q13042 620 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 OASLQ15646 514 aaKnown RBP4.77□□□□□ -1.65
VPS36-206ENST00000497149 ATP13A5Q4VNC0 1218 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 ZNF805Q5CZA5 627 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 DCST1Q5T197 706 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 FRG2Q64ET8 278 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 C16orf54Q6UWD8 224 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 SDCCAG8Q86SQ7 713 aaPredicted RBP4.77□□□□□ -1.65
VPS36-206ENST00000497149 PCDH20Q8N6Y1 951 aaKnown RBP4.77□□□□□ -1.65
VPS36-206ENST00000497149 ZNF114Q8NC26 417 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 MAGEC3Q8TD91 643 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 TRPC4APQ8TEL6 797 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 RHBDF1Q96CC6 855 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 MTBPQ96DY7 904 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 SAT2Q96F10 170 aaPredicted RBP4.77□□□□□ -1.65
VPS36-206ENST00000497149 CCDC34Q96HJ3 373 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 ZNF479Q96JC4 524 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 GAD1Q99259 594 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 C1QTNF1Q9BXJ1 281 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 IL25Q9H293 177 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 PIGMQ9H3S5 423 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 PCDH9Q9HC56 1237 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 OCIAD1Q9NX40 245 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 TMEM5Q9Y2B1 443 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 NFS1Q9Y697 457 aa4.77□□□□□ -1.65
VPS36-206ENST00000497149 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 B4DLN1 442 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 OGG1O15527 345 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 SMAD6O43541 496 aaKnown RBP4.76□□□□□ -1.65
VPS36-206ENST00000497149 DDNO94850 711 aaPredicted RBP4.76□□□□□ -1.65
VPS36-206ENST00000497149 CLDN14O95500 239 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 NGFRP08138 427 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 SNHG28P0DPA3 235 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 FASLGP48023 281 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 PEX5P50542 639 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 CLCNKAP51800 687 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 MRPL12P52815 198 aaKnown RBP4.76□□□□□ -1.65
VPS36-206ENST00000497149 MFAP4P55083 255 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 SNX16P57768 344 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 NANOS2P60321 138 aaKnown RBP4.76□□□□□ -1.65
VPS36-206ENST00000497149 MRPS5P82675 430 aaKnown RBP4.76□□□□□ -1.65
VPS36-206ENST00000497149 MYBPHQ13203 477 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 TOMM20Q15388 145 aa4.76□□□□□ -1.65
VPS36-206ENST00000497149 DECR1Q16698 335 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms