RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	EIF3CL	B5ME19	914 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	STX16-NPEPL1	H3BU86	382 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	E2F3	O00716	465 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	TRDMT1	O14717	391 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CHUK	O15111	745 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	POLR2D	O15514	142 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	RIPK2	O43353	540 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	SPRY3	O43610	288 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KRT86	O43790	486 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	SPOP	O43791	374 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	IDH3B	O43837	385 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	RPS6KA5	O75582	802 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	TMCC1	O94876	653 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KRT14	P02533	472 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	OPN1MW	P04001	364 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CCDC166	P0CW27	439 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	OPN1MW2	P0DN77	364 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	OPN1MW3	P0DN78	364 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CSF2RA	P15509	400 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	NPPB	P16860	134 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	DNAJB1	P25685	340 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	PSMC2	P35998	433 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	HNF4A	P41235	474 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	IFNAR2	P48551	515 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	GPC3	P51654	580 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CLNS1A	P54105	237 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	SST	P61278	116 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	COG7	P83436	770 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	DSC1	Q08554	894 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	NIPAL4	Q0D2K0	466 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	MSLN	Q13421	630 aa	Predicted RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KRT81	Q14533	505 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	MPEG1	Q2M385	716 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	MAJIN	Q3KP22	176 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672		Q3ZCU0	254 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	DCAF12L2	Q5VW00	463 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	OR7E24	Q6IFN5	339 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	NEPRO	Q6NW34	567 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	ALKBH5	Q6P6C2	394 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	B3GNT6	Q6ZMB0	384 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CCDC121	Q6ZUS5	278 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	ENOSF1	Q7L5Y1	443 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	GALNTL5	Q7Z4T8	443 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	TADA2B	Q86TJ2	420 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KLB	Q86Z14	1044 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	OR2C3	Q8N628	320 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KCNH5	Q8NCM2	988 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CEP70	Q8NHQ1	597 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	RFWD2	Q8NHY2	731 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	SLC22A8	Q8TCC7	542 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	POF1B	Q8WVV4	589 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	RAPGEF5	Q92565	580 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	KIFAP3	Q92845	792 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	TRIM63	Q969Q1	353 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	FAM149B1	Q96BN6	582 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	LMLN	Q96KR4	655 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	SPATA17	Q96L03	361 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CCDC138	Q96M89	665 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	NUDCD1	Q96RS6	583 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	PRPF18	Q99633	342 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	HNRNPAB	Q99729	332 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	GPATCH1	Q9BRR8	931 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	SCPEP1	Q9HB40	452 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	TXLNG	Q9NUQ3	528 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	RRN3	Q9NYV6	651 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CIDEB	Q9UHD4	219 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	AMACR	Q9UHK6	382 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	LCMT1	Q9UIC8	334 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	RASAL2	Q9UJF2	1139 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	FBXO4	Q9UKT5	387 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	PHTF1	Q9UMS5	762 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	DTX4	Q9Y2E6	619 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	C15orf41	Q9Y2V0	281 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.73	□□□□□ -1.65	1e-6	■□□□□ 11
CCDC66-222	ENST00000494672	PTGDR2	Q9Y5Y4	395 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672	TNIK	Q9UKE5	1360 aa		4.73	□□□□□ -1.65
CCDC66-222	ENST00000494672		A0A1B0GVT2	93 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	hCG_1642624	A0A1W2PR95	340 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	LRRD1	A4D1F6	860 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	INAFM1	C9JVW0	142 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	GOLGA8S	H3BPF8	625 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	PSMD14	O00487	310 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	PIP5K1B	O14986	540 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	WDR46	O15213	610 aa	Known RBP	4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	BIRC5	O15392	142 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	RGS14	O43566	566 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	ACSL4	O60488	711 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	TSPAN3	O60637	253 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	PLA2G6	O60733	806 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	RPP40	O75818	363 aa	Known RBP	4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	HSPA4L	O95757	839 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	DDX58	O95786	925 aa	Known RBP	4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	S100A9	P06702	114 aa	Known RBP	4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	APOA4	P06727	396 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	PEPD	P12955	493 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	HSD3B1	P14060	373 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	JAK1	P23458	1154 aa		4.72	□□□□□ -1.65
CCDC66-222	ENST00000494672	KLRK1	P26718	216 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms