RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 RFFLQ8WZ73 363 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 INTS12Q96CB8 462 aaKnown RBP5.09□□□□□ -1.59
NCL-210ENST00000494618 ACOX2Q99424 681 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 PIP5K1AQ99755 562 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 STRA6Q9BX79 667 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 SPRY4Q9C004 299 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 USP44Q9H0E7 712 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 MMP28Q9H239 520 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 SLC28A3Q9HAS3 691 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 KLHL1Q9NR64 748 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 RALYQ9UKM9 306 aaKnown RBP5.09□□□□□ -1.59
NCL-210ENST00000494618 ZNF711Q9Y462 761 aa5.09□□□□□ -1.59
NCL-210ENST00000494618 GREB1LQ9C091 1923 aaPredicted RBP5.09□□□□□ -1.6
NCL-210ENST00000494618 NKX2-2O95096 273 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 HLA-DOBP13765 273 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 MYOD1P15172 320 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 ANOS1P23352 680 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 ELF1P32519 619 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 KRT9P35527 623 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 PITX1P78337 314 aaPredicted RBP5.08□□□□□ -1.6
NCL-210ENST00000494618 TMEM115Q12893 351 aaPredicted RBP5.08□□□□□ -1.6
NCL-210ENST00000494618 RBBP5Q15291 538 aaKnown RBP5.08□□□□□ -1.6
NCL-210ENST00000494618 TMEM35AQ53FP2 167 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 BRAT1Q6PJG6 821 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 DPPA4Q7L190 304 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 GPR180Q86V85 440 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 DIS3L2Q8IYB7 885 aaKnown RBP5.08□□□□□ -1.6
NCL-210ENST00000494618 IL17RCQ8NAC3 791 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 DMBX1Q8NFW5 382 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 THAP6Q8TBB0 222 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 PIGTQ969N2 578 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 RRNAD1Q96FB5 475 aaKnown RBP5.08□□□□□ -1.6
NCL-210ENST00000494618 SYT17Q9BSW7 474 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 SLC26A6Q9BXS9 759 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 CSTL1Q9H114 145 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 FBRSL1Q9HCM7 1045 aaKnown RBP5.08□□□□□ -1.6
NCL-210ENST00000494618 LTB4R2Q9NPC1 389 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 ACSL5Q9ULC5 683 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 MAU2Q9Y6X3 613 aa5.08□□□□□ -1.6
NCL-210ENST00000494618 PTPRCP08575 1304 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 NPIPB15A6NHN6 443 aaPredicted RBP5.07□□□□□ -1.6
NCL-210ENST00000494618 P2RY10O00398 339 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 HS3ST1O14792 307 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 PAGE4O60829 102 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 SP1P08047 785 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 ATP1A3P13637 1013 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 ITGA2P17301 1181 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 UBA1P22314 1058 aaKnown RBP5.07□□□□□ -1.6
NCL-210ENST00000494618 CCR9P51686 369 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 TAS2R38P59533 333 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 MAD2L1Q13257 205 aaPredicted RBP5.07□□□□□ -1.6
NCL-210ENST00000494618 G3BP1Q13283 466 aaKnown RBP eCLIP5.07□□□□□ -1.61e-7■□□□□ 11.1
NCL-210ENST00000494618 GTF2H2Q13888 395 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 MYLK3Q32MK0 819 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 CXorf66Q5JRM2 361 aaPredicted RBP5.07□□□□□ -1.6
NCL-210ENST00000494618 OTUD3Q5T2D3 398 aaPredicted RBP5.07□□□□□ -1.6
NCL-210ENST00000494618 PDSS1Q5T2R2 415 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 GTF2H2CQ6P1K8 395 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 DSG4Q86SJ6 1040 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 SMIM29Q86T20 159 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 BEST3Q8N1M1 668 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 PCYOX1LQ8NBM8 494 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 OR14L1PQ8NHC6 308 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 APBB2Q92870 758 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 TAAR8Q969N4 342 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 IGSF8Q969P0 613 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 MMABQ96EY8 250 aaPredicted RBP5.07□□□□□ -1.6
NCL-210ENST00000494618 GRAMD2BQ96HH9 432 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 PPM1MQ96MI6 270 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 NEURL2Q9BR09 285 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 LRRC1Q9BTT6 524 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 SDF2L1Q9HCN8 221 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 IRAK4Q9NWZ3 460 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 ABI3Q9P2A4 366 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 FBXL2Q9UKC9 423 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 WDR81Q562E7 1941 aa5.07□□□□□ -1.6
NCL-210ENST00000494618 CAPN9O14815 690 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 CREB3O43889 395 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 WDR1O75083 606 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 SLC25A12O75746 678 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 RTN3O95197 1032 aaPredicted RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 IPO7O95373 1038 aaKnown RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 HSPA1AP0DMV8 641 aaKnown RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 HSPA1BP0DMV9 641 aaKnown RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 ICAM3P32942 547 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 BSGP35613 385 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 CLCN3P51790 818 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 CSTF3Q12996 717 aaKnown RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 TBX2Q13207 712 aaPredicted RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 ZNF234Q14588 700 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 DECR1Q16698 335 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 CCDC96Q2M329 555 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 KBTBD3Q8NAB2 608 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 LRRC8CQ8TDW0 803 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 SGCDQ92629 289 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 TRMT61BQ9BVS5 477 aaKnown RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 SIL1Q9H173 461 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 UNC45AQ9H3U1 944 aa5.06□□□□□ -1.6
NCL-210ENST00000494618 SEBOXQ9HB31 216 aaPredicted RBP5.06□□□□□ -1.6
NCL-210ENST00000494618 MDFICQ9P1T7 246 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms