RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SUZ12Q15022 739 aaKnown RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ACOX1Q15067 660 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 SIX1Q15475 284 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ANKRD20A2Q5SQ80 823 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ANKRD20A1Q5TYW2 823 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ANKRD20A3Q5VUR7 823 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 PNCKQ6P2M8 343 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ZNF765Q7L2R6 523 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 PID1Q7Z2X4 250 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 NLRP8Q86W28 1048 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ATCAYQ86WG3 371 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 CDKL3Q8IVW4 592 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 NDUFAF2Q8N183 169 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 RTP4Q96DX8 246 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 NUS1Q96E22 293 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 MLPHQ9BV36 600 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 TCEAL2Q9H3H9 227 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 SLC32A1Q9H598 525 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 UCKL1Q9NWZ5 548 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 KCTD5Q9NXV2 234 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 UBP1Q9NZI7 540 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 KLHL8Q9P2G9 620 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 OR1A2Q9Y585 309 aa8.75□□□□□ -1.01
ITGB1-217ENST00000494395 ZFC3H1O60293 1989 aaKnown RBP8.75□□□□□ -1.01
ITGB1-217ENST00000494395 COL27A1Q8IZC6 1860 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PLXNB3Q9ULL4 1909 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 LY6G6EA0A0G2JKS1 128 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SPAARA0A1B0GVQ0 90 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 C5orf60A6NFR6 353 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 TRIM38O00635 465 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 KCNN4O15554 427 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SDC3O75056 442 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PMPCBO75439 489 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 EPOP01588 193 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ITGAVP06756 1048 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 TSHRP16473 764 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PSMB4P28070 264 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PMLP29590 882 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ADRA1AP35348 466 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 WNT3AP56704 352 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 HNRNPKP61978 463 aaKnown RBP eCLIP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 MPP3Q13368 585 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ARHGEF7Q14155 803 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PTK2BQ14289 1009 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 RPS6KA1Q15418 735 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 OASLQ15646 514 aaKnown RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 TRIP6Q15654 476 aaKnown RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PCSK7Q16549 785 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ALG11Q2TAA5 492 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ZNF542PQ5EBM4 170 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 HENMT1Q5T8I9 393 aaKnown RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SEL1L2Q5TEA6 688 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 CCDC181Q5TID7 509 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 TMC3Q7Z5M5 1100 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SLCO6A1Q86UG4 719 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SLC13A5Q86YT5 568 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PHACTR4Q8IZ21 702 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 NRSN1Q8IZ57 195 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 RBFAQ8N0V3 343 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 PAF1Q8N7H5 531 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ZNF548Q8NEK5 533 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 OR4C6Q8NH72 309 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SETD7Q8WTS6 366 aaKnown RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ATG4AQ8WYN0 398 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SCAMP4Q969E2 229 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SPATA13Q96N96 652 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ALS2CR12Q96Q35 445 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 CDC6Q99741 560 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 LGR4Q9BXB1 951 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 TEX101Q9BY14 249 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ADGRE3Q9BY15 652 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 FRMD8Q9BZ67 464 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ABCG8Q9H221 673 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 MAGEE1Q9HCI5 957 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 TIMMDC1Q9NPL8 285 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 DNAJC28Q9NX36 388 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 NFKBIL1Q9UBC1 381 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 SPO11Q9Y5K1 396 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 U3KQA8 63 aa8.74□□□□□ -1.01
ITGB1-217ENST00000494395 ARHGEF17Q96PE2 2063 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-217ENST00000494395 C1orf232A0A0U1RR37 186 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 GOLGA6L9A6NEM1 432 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 TMEM202A6NGA9 273 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 F5H423 210 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-217ENST00000494395 TNFRSF10CO14798 259 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 AURKAO14965 403 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 SCAMP1O15126 338 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 TNFSF14O43557 240 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 LIASO43766 372 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 GCATO75600 419 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 ZNF189O75820 626 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-217ENST00000494395 FUCA1P04066 466 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 PIRTP0C851 137 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 CHRNA4P43681 627 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 SPINT3P49223 89 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 HK3P52790 923 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 THOP1P52888 689 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 GEMP55040 296 aa8.73□□□□□ -1.01
ITGB1-217ENST00000494395 DCDC1P59894 354 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms