RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 PCOLCE2Q9UKZ9 415 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 CNOT6Q9ULM6 557 aaKnown RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 KCTD3Q9Y597 815 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 CABIN1Q9Y6J0 2220 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 C2orf81A6NN90 581 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 TNFRSF10CO14798 259 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 INPP4BO15327 924 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 KCNK5O95279 499 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 CRTAMO95727 393 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 TNFP01375 233 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 FUCA1P04066 466 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 CEACAM5P06731 702 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 APRTP07741 180 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 GIMD1P0DJR0 217 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 PAFAH1B1P43034 410 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 GRK6P43250 576 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 VPS41P49754 854 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 BLKP51451 505 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 CDH17Q12864 832 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 ZDHHC20Q5W0Z9 365 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 RD3Q7Z3Z2 195 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 HID1Q8IV36 788 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 TRAM1L1Q8N609 369 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 OR4K2Q8NGD2 314 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 BTN2A2Q8WVV5 523 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 TRIM44Q96DX7 344 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 HIC2Q96JB3 615 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 PLEKHG4BQ96PX9 1271 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 ZSCAN5AQ9BUG6 496 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 FRMD8Q9BZ67 464 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 SLC13A1Q9BZW2 595 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 SLC32A1Q9H598 525 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 IL26Q9NPH9 171 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 CASS4Q9NQ75 786 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 RNF14Q9UBS8 474 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 APOBEC3BQ9UH17 382 aaKnown RBP13.46□□□□□ -0.25
COL1A1-208ENST00000494334 PKP3Q9Y446 797 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 DGKBQ9Y6T7 804 aa13.46□□□□□ -0.25
COL1A1-208ENST00000494334 WDR87Q6ZQQ6 2873 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-208ENST00000494334 TCRBV7S3A2A0A539 114 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 GIPC1O14908 333 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 SCAMP1O15126 338 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 AQP9O43315 295 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 LDB2O43679 373 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 PPFIA2O75334 1257 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 RASGRP1O95267 797 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 CEACAM1P13688 526 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 SPAM1P38567 509 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 POLD2P49005 469 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 GPS1Q13098 491 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 C1orf61Q13536 156 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 PDPK2PQ6A1A2 396 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 PPP1R21Q6ZMI0 780 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 TRIM74Q86UV6 250 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 EID2Q8N6I1 236 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 DNAAF3Q8N9W5 541 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF548Q8NEK5 533 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-208ENST00000494334 OR13C4Q8NGS5 318 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 BAHD1Q8TBE0 780 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-208ENST00000494334 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 LMX1AQ8TE12 382 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 GRK7Q8WTQ7 553 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
COL1A1-208ENST00000494334 TBATAQ96M53 351 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 C16orf45Q96MC5 204 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-208ENST00000494334 LRRC61Q9BV99 259 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 CLPBQ9H078 707 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 CYP4F12Q9HCS2 524 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 MOSPD1Q9UJG1 213 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 SLC17A4Q9Y2C5 497 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 TMEM98Q9Y2Y6 226 aa13.45□□□□□ -0.26
COL1A1-208ENST00000494334 OAS3Q9Y6K5 1087 aaKnown RBP13.45□□□□□ -0.26
COL1A1-208ENST00000494334 GLYATL1P3A0A0U1RQE8 302 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 PRSS38A1L453 326 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 NEMP2A6NFY4 417 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 GAPDHSO14556 408 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-208ENST00000494334 ECEL1O95672 775 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CELA2BP08218 269 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CTSEP14091 401 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 TPSB2P20231 275 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 NOVA1P51513 510 aaKnown RBP13.44□□□□□ -0.26
COL1A1-208ENST00000494334 ZNF140P52738 457 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-208ENST00000494334 TERF1P54274 439 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 PDE1BQ01064 536 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 POU6F1Q14863 301 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CHRNA6Q15825 494 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 INAVAQ3KP66 663 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 ATP13A5Q4VNC0 1218 aa13.44□□□□□ -0.26
COL1A1-208ENST00000494334 CERCAMQ5T4B2 595 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms