RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LEKR1Q6ZMV7 388 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 ERN2Q76MJ5 926 aaKnown RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 ZNF571Q7Z3V5 609 aaPredicted RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 GLRX5Q86SX6 157 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 TRIM69Q86WT6 500 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 ZNF354CQ86Y25 554 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 DNAAF5Q86Y56 855 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 GATAD2AQ86YP4 633 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 RYBPQ8N488 228 aaPredicted RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 FBXO15Q8NCQ5 510 aaPredicted RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.2□□□□□ -1.1
RIF1-211ENST00000494333 KLK6Q92876 244 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 PPP1R16AQ96I34 528 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 ELF4Q99607 663 aaPredicted RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 CNPY3Q9BT09 278 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 SYT11Q9BT88 431 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 TM6SF2Q9BZW4 377 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 PREBQ9HCU5 417 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 GDF3Q9NR23 364 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 PARVAQ9NVD7 372 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 HECAQ9UBI9 543 aaPredicted RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 KLK13Q9UKR3 277 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 FZD10Q9ULW2 581 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 DMTF1Q9Y222 760 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 APOBEC2Q9Y235 224 aaKnown RBP8.2□□□□□ -1.1
RIF1-211ENST00000494333 BTBD3Q9Y2F9 522 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 ADAMTS9Q9P2N4 1935 aa8.2□□□□□ -1.1
RIF1-211ENST00000494333 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PCNX2A6NKB5 2137 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PRAMEF26H0Y7S4 382 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 BUB1O43683 1085 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 KDELR3O43731 214 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 MAGEC1O60732 1142 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 ATXN1LP0C7T5 689 aaKnown RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 GZMAP12544 262 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PRLRP16471 622 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PSMA2P25787 234 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 GKP32189 559 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 NUDT1P36639 197 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PRKCIP41743 596 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 GRK6P43250 576 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 NEK3P51956 506 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 AIF1P55008 147 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 GEMIN4P57678 1058 aaKnown RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 NXPH1P58417 271 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 OGDHQ02218 1023 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 SHBQ15464 509 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PLEKHN1Q494U1 663 aaPredicted RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 SETMARQ53H47 684 aaPredicted RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 PLEKHA7Q6IQ23 1121 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 TMC6Q7Z403 805 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 LUZP1Q86V48 1076 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 HORMAD1Q86X24 394 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 RTL3Q8N8U3 475 aaKnown RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 NETO2Q8NC67 525 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 OR6K2Q8NGY2 324 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 ADAMTS14Q8WXS8 1223 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 ISG20Q96AZ6 181 aaKnown RBP8.19□□□□□ -1.1
RIF1-211ENST00000494333 MYOCQ99972 504 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 EDEM3Q9BZQ6 932 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 ZDHHC6Q9H6R6 413 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 CATSPERBQ9H7T0 1116 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 NEU3Q9UQ49 428 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 CA5BQ9Y2D0 317 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 NEUROG3Q9Y4Z2 214 aa8.19□□□□□ -1.1
RIF1-211ENST00000494333 TMEM191CA6NGB0 347 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 RASA4BC9J798 803 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 GOLGA6L19H0YKK7 550 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 KRIT1O00522 736 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 DDX3XO00571 662 aaKnown RBP eCLIP8.18□□□□□ -1.12e-13■■□□□ 11.4
RIF1-211ENST00000494333 AQP7O14520 342 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 RASA4O43374 803 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 TNFSF14O43557 240 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 KRT37O76014 449 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 RNF8O76064 485 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 POP4O95707 220 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 PAK4O96013 591 aaPredicted RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 PROS1P07225 676 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 ADRB3P13945 408 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 ARRB1P49407 418 aaPredicted RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 UBASH3AP57075 661 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 YBEYP58557 167 aaPredicted RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 TPI1P60174 286 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 SNRPD1P62314 119 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 PRR5P85299 388 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 OVGP1Q12889 678 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 ZNF284Q2VY69 593 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 MYLK3Q32MK0 819 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 CCDC157Q569K6 752 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 FIGNQ5HY92 759 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 ERMARDQ5T6L9 678 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 SEL1L3Q68CR1 1132 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 IQCHQ86VS3 1027 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 SPATS2Q86XZ4 545 aaKnown RBP8.18□□□□□ -1.1
RIF1-211ENST00000494333 ARFGAP1Q8N6T3 406 aa8.18□□□□□ -1.1
RIF1-211ENST00000494333 OR2AP1Q8NGE2 309 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms