RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 APODP05090 189 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 PRDX6P30041 224 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 ICAM3P32942 547 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 NR1D2Q14995 579 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CYP1B1Q16678 543 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SDHAF4Q5VUM1 108 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CAPN13Q6MZZ7 669 aaPredicted RBP19.11■□□□□ 0.65
COL27A1-207ENST00000494090 ZYG11AQ6WRX3 759 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CAPN1P07384 714 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 LPCAT4Q643R3 524 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CNSTQ6PJW8 725 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 KLHL17Q6TDP4 642 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 UBASH3BQ8TF42 649 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SLC47A1Q96FL8 570 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 RHOBTB2Q9BYZ6 727 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 MIR1-1HGQ9H1L0 117 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 EPB41L1Q9H4G0 881 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 EXO5Q9H790 373 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 KCTD5Q9NXV2 234 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 PCDHGB3Q9Y5G1 929 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 GTPBP1O00178 669 aaKnown RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 RFXANKO14593 260 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 RPL4P36578 427 aaKnown RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 LIMK2P53671 638 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF483Q8TF39 744 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 S100ZQ8WXG8 99 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 EXOC2Q96KP1 924 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 RSPH9Q9H1X1 276 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 PDZD7Q9H5P4 517 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 AGO3Q9H9G7 860 aaKnown RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 GSAPA4D1B5 854 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 C2orf71A6NGG8 1288 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 CCNYL3P0C7X3 344 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 C17orf64Q86WR6 236 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 HPS6Q86YV9 775 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 UXS1Q8NBZ7 420 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 EEF1AKMT1Q8WVE0 214 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 FNDC11Q9BVV2 318 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 SEMA3GQ9NS98 782 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 EXD2Q9NVH0 621 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 ERGIC3Q9Y282 383 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 RIPK3Q9Y572 518 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 NFATC1O95644 943 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 CPSF6Q16630 551 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 GPR107Q5VW38 600 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 PPCDCQ96CD2 204 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 SAMHD1Q9Y3Z3 626 aaKnown RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 CCNCP24863 283 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 BRCC3P46736 316 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 FLT3LGP49771 235 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 CERS6Q6ZMG9 384 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 OTOP3Q7RTS5 596 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 RTL3Q8N8U3 475 aaKnown RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 STXBP5LQ9Y2K9 1186 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 POLR3HQ9Y535 204 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF37AP17032 561 aaPredicted RBP19.1■□□□□ 0.65
COL27A1-207ENST00000494090 CTPS1P17812 591 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 TIGD2Q4W5G0 525 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 SPOCK2Q92563 424 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 SEZ6LQ9BYH1 1024 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 ETAA1Q9NY74 926 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 DEC1Q9P2X7 70 aa19.1■□□□□ 0.65
COL27A1-207ENST00000494090 PRMT5O14744 637 aaPredicted RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 DHX15O43143 795 aaKnown RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 KRT33AO76009 404 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 KBTBD2Q8IY47 623 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 RAVER1Q8IY67 606 aaKnown RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 MUC13Q9H3R2 512 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 CHRAC1Q9NRG0 131 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 MAP10Q9P2G4 905 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 N6AMT1Q9Y5N5 214 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 IRGMA1A4Y4 181 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 MAPKAPK2P49137 400 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 PHYKPLQ8IUZ5 450 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 PGAM4Q8N0Y7 254 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 CNTD1Q8N815 330 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 CFAP97Q9P2B7 532 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 SUCOQ9UBS9 1254 aaKnown RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 FETUBQ9UGM5 382 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 TRPS1Q9UHF7 1281 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 PRMT3O60678 531 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 RHOQP17081 205 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 GPD2P43304 727 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 GPR156Q8NFN8 814 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 TRPM4Q8TD43 1214 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 NXNL1Q96CM4 212 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 ZHX1-C8orf76Q96EF9 292 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 FAXDC2Q96IV6 333 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 BTBD9Q96Q07 612 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 AIF1LQ9BQI0 150 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 DLG2Q15700 870 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 ASTE1Q2TB18 679 aaPredicted RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 MTX3Q5HYI7 312 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 CPSF7Q8N684 471 aaKnown RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 SRFBP1Q8NEF9 429 aaKnown RBP19.09■□□□□ 0.65
COL27A1-207ENST00000494090 OR2T12Q8NG77 320 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 RAB26Q9ULW5 256 aa19.09■□□□□ 0.65
COL27A1-207ENST00000494090 DNM1LO00429 736 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms