RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 ICAM3P32942 547 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 GRIA4P48058 902 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SLC7A2P52569 658 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 RPS6P62753 249 aaKnown RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SEMA5AQ13591 1074 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 GALNT3Q14435 633 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ACOX1Q15067 660 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TAF5Q15542 800 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TTC23Q5W5X9 447 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 CCDC103Q8IW40 242 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 GALNT12Q8IXK2 581 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ADGRG5Q8IZF4 528 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 C8orf59Q8N0T1 100 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 FAM109AQ8N4B1 249 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 DCLK2Q8N568 766 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 DYNC2LI1Q8TCX1 351 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SP7Q8TDD2 431 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 JPH3Q8WXH2 748 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 PROX1Q92786 737 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 PPP1R36Q96LQ0 422 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 RNF157Q96PX1 679 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
EPHA3-203ENST00000494014 RBBP8Q99708 897 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 TMEM246Q9BRR3 403 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ABCB10Q9NRK6 738 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF358Q9NW07 568 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ASNSD1Q9NWL6 643 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ZDHHC2Q9UIJ5 367 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 USP18Q9UMW8 372 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 ANKRD6Q9Y2G4 727 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 NAALAD2Q9Y3Q0 740 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 SCN5AQ14524 2016 aa7.05□□□□□ -1.28
EPHA3-203ENST00000494014 A0A096LPK6 155 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 FAM149AA5PLN7 773 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 SDHDO14521 159 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 APOL1O14791 398 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 SHOXO15266 292 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 EXTL3O43909 919 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TMCC2O75069 709 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TRIM16O95361 564 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 SNAP29O95721 258 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 CHRNA1P02708 482 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 JUNP05412 331 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 NAGAP17050 411 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 MIPP30301 263 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 AXLP30530 894 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 DDOSTP39656 456 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 HADHAP40939 763 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ATP4BP51164 291 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 CLCNKBP51801 687 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 LIMK2P53671 638 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 CDH6P55285 790 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TAGLNQ01995 201 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 RAD51Q06609 339 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 DMP1Q13316 513 aaPredicted RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TTLL4Q14679 1199 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TYSND1Q2T9J0 566 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 AGKQ53H12 422 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TDRD10Q5VZ19 366 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 CASC4Q6P4E1 433 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 SYCE2Q6PIF2 218 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 R3HCC1LQ7Z5L2 792 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 PAPD5Q8NDF8 572 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 PPTC7Q8NI37 304 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 GABPB2Q8TAK5 448 aaPredicted RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 URGCPQ8TCY9 931 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 MYLIPQ8WY64 445 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 PEX13Q92968 403 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 MUS81Q96NY9 551 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ASPSCR1Q9BZE9 553 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ADNPQ9H2P0 1102 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 MRM3Q9HC36 420 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ATP13A2Q9NQ11 1180 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ABCD2Q9UBJ2 740 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ANAPC2Q9UJX6 822 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 AP4E1Q9UPM8 1137 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 PDE10AQ9Y233 779 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 MRPL11Q9Y3B7 192 aaKnown RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 GRIP1Q9Y3R0 1128 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 PCDHGB1Q9Y5G3 927 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ATG2AQ2TAZ0 1938 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 NLRC5Q86WI3 1866 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 MAGEB16A2A368 324 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 WDR27A2RRH5 827 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 NRP1O14786 923 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 NPHS1O60500 1241 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TSPAN1O60635 241 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 F2P00734 622 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 LTFP02788 710 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TRAPPC2P0DI81 140 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 TRAPPC2BP0DI82 140 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 GFAPP14136 432 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 IL32P24001 234 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 HOXA13P31271 388 aaPredicted RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 ZNF135P52742 658 aaPredicted RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 AP2S1P53680 142 aaPredicted RBP7.04□□□□□ -1.28
EPHA3-203ENST00000494014 BCAR1P56945 870 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 BNC1Q01954 994 aa7.04□□□□□ -1.28
EPHA3-203ENST00000494014 GRIN2CQ14957 1233 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms