RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 C1orf232A0A0U1RR37 186 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 AGRPO00253 132 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 PSTPIP1O43586 416 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 ZNF30P17039 623 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 TEAD1P28347 426 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 GABREP78334 506 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 B4GALNT1Q00973 533 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 PYCR3Q53H96 274 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 C3orf38Q5JPI3 329 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 HENMT1Q5T8I9 393 aaKnown RBP12.54□□□□□ -0.4
HSPG2-212ENST00000493940 KDELC1Q6UW63 502 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 NT5DC3Q86UY8 548 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
HSPG2-212ENST00000493940 NLRP8Q86W28 1048 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 NAGSQ8N159 534 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 GPR26Q8NDV2 337 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 FAM118BQ9BPY3 351 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 GORASP1Q9BQQ3 440 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 MLPHQ9BV36 600 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-212ENST00000493940 FOXP3Q9BZS1 431 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 DPEP2Q9H4A9 486 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 TAAR2Q9P1P5 351 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 TMPRSS11EQ9UL52 423 aa12.54□□□□□ -0.4
HSPG2-212ENST00000493940 TRBV23OR9-2A0A075B6M9 112 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 PPM1DO15297 605 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 DNAJC6O75061 913 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 ZRANB2O95218 330 aaKnown RBP eCLIP12.53□□□□□ -0.41e-8■□□□□ 10.3
HSPG2-212ENST00000493940 ECEL1O95672 775 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 RPLP0P05388 317 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 IVLP07476 585 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 NFKB1P19838 968 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 KELP23276 732 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 CHRNA4P43681 627 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 LSSP48449 732 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 RPIAP49247 311 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 RPL26P61254 145 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 TBC1D25Q3MII6 688 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 C14orf28Q4W4Y0 310 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 CERCAMQ5T4B2 595 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 C11orf63Q6NUN7 778 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 SLC30A9Q6PML9 568 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 ZNF574Q6ZN55 896 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 RBM44Q6ZP01 1051 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 MICALCLQ6ZW33 695 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 ZNF765Q7L2R6 523 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 NRSN1Q8IZ57 195 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 ZNF567Q8N184 647 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 ATL2Q8NHH9 583 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 SNIP1Q8TAD8 396 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 ALG3Q92685 438 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 GLMNQ92990 594 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 NAT6Q93015 286 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 OXNAD1Q96HP4 312 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 HIC2Q96JB3 615 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 LRRN3Q9H3W5 708 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 NCKIPSDQ9NZQ3 722 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 RPL26L1Q9UNX3 145 aaKnown RBP12.53□□□□□ -0.4
HSPG2-212ENST00000493940 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
HSPG2-212ENST00000493940 GRID2IPA4D2P6 1211 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 EIF4E1BA6NMX2 242 aaKnown RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 PMPCBO75439 489 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 HGFP14210 728 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 CTNNA1P35221 906 aaKnown RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 CYLC1P35663 651 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 OR1D5P58170 312 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 CFHR1Q03591 330 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 CDK18Q07002 472 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 OLIG2Q13516 323 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 KHDC1Q4VXA5 237 aaKnown RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 BBS12Q6ZW61 710 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 SPRED1Q7Z699 444 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 DAAM2Q86T65 1068 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 TMTC1Q8IUR5 882 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 ARL14Q8N4G2 192 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 EXD1Q8NHP7 514 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 ZDHHC1Q8WTX9 485 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 TFB1MQ8WVM0 346 aaKnown RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 FGF11Q92914 225 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 MRGPRX2Q96LB1 330 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 ZNF830Q96NB3 372 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-212ENST00000493940 SLC46A1Q96NT5 459 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 FAM83DQ9H4H8 585 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 SYNDIG1Q9H7V2 258 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 BPIFA1Q9NP55 256 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 KCTD5Q9NXV2 234 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 APPL1Q9UKG1 709 aa12.52□□□□□ -0.41
HSPG2-212ENST00000493940 LOC285095A0A1B0GVY8 99 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms