RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CCDC70Q6NSX1 233 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 FAM171BQ6P995 826 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 ZNF790Q6PG37 636 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 CHERPQ8IWX8 916 aaKnown RBP3.96□□□□□ -1.78
SMC4-223ENST00000493695 ESX1Q8N693 406 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 TSPYL6Q8N831 410 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 NAXEQ8NCW5 288 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 STAMQ92783 540 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 SNAPC3Q92966 411 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 EIF2AK1Q9BQI3 630 aaKnown RBP3.96□□□□□ -1.78
SMC4-223ENST00000493695 FUZQ9BT04 418 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 AGXT2Q9BYV1 514 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 WDR13Q9H1Z4 485 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 NDST4Q9H3R1 872 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 BPIFA1Q9NP55 256 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 UBN1Q9NPG3 1134 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 IL1RAPL1Q9NZN1 696 aa3.96□□□□□ -1.78
SMC4-223ENST00000493695 A0A0G2JLW4 131 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 EDN2P20800 178 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 POU1F1P28069 291 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 LUMP51884 338 aaPredicted RBP3.95□□□□□ -1.78
SMC4-223ENST00000493695 TBX2Q13207 712 aaPredicted RBP3.95□□□□□ -1.78
SMC4-223ENST00000493695 BAK1Q16611 211 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 TTI2Q6NXR4 508 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 SUSD1Q6UWL2 747 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 ASB18Q6ZVZ8 466 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 LRRC8DQ7L1W4 858 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 OR2AK2Q8NG84 335 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 TFB2MQ9H5Q4 396 aaKnown RBP3.95□□□□□ -1.78
SMC4-223ENST00000493695 SNTG1Q9NSN8 517 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 ZNF624Q9P2J8 865 aaPredicted RBP3.95□□□□□ -1.78
SMC4-223ENST00000493695 PEMTQ9UBM1 199 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 SLC25A10Q9UBX3 287 aaPredicted RBP3.95□□□□□ -1.78
SMC4-223ENST00000493695 TTC7AQ9ULT0 858 aaPredicted RBP3.95□□□□□ -1.78
SMC4-223ENST00000493695 HSF4Q9ULV5 492 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 RNF215Q9Y6U7 377 aa3.95□□□□□ -1.78
SMC4-223ENST00000493695 IGLV5-45A0A087WSX0 123 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 GOLGA6L9A6NEM1 432 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 HNRNPH2P55795 449 aaKnown RBP3.94□□□□□ -1.78
SMC4-223ENST00000493695 TMEM35AQ53FP2 167 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 SLC9C2Q5TAH2 1124 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 SERTAD4-AS1Q5TG53 156 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 JAKMIP3Q5VZ66 844 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 OR7E24Q6IFN5 339 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 ANKRD54Q6NXT1 300 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 MTSS1LQ765P7 747 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.94□□□□□ -1.78
SMC4-223ENST00000493695 BEST2Q8NFU1 509 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 ZBTB10Q96DT7 871 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 LINGO1Q96FE5 620 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 EGFL8Q99944 293 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 TRIM15Q9C019 465 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 MAF1Q9H063 256 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 BICC1Q9H694 974 aaKnown RBP3.94□□□□□ -1.78
SMC4-223ENST00000493695 MAGEE1Q9HCI5 957 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 DDX4Q9NQI0 724 aaKnown RBP3.94□□□□□ -1.78
SMC4-223ENST00000493695 PAK5Q9P286 719 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 FBXO9Q9UK97 447 aaPredicted RBP3.94□□□□□ -1.78
SMC4-223ENST00000493695 TBX20Q9UMR3 447 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 STON1Q9Y6Q2 735 aa3.94□□□□□ -1.78
SMC4-223ENST00000493695 MEIOCA2RUB1 952 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 GAGE10A6NGK3 116 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 NR5A2O00482 541 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 PSMD14O00487 310 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 CLIC2O15247 247 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 MMP2P08253 660 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 XBP1P17861 261 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 GPD2P43304 727 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 MMP14P50281 582 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 GNB1P62873 340 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 GRIK3Q13003 919 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 TAF11Q15544 211 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 WDR38Q5JTN6 314 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 C17orf99Q6UX52 265 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 P2RY8Q86VZ1 359 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 ANKRD52Q8NB46 1076 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 ZCCHC10Q8TBK6 192 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 WDR20Q8TBZ3 569 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 ZNF653Q96CK0 615 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
SMC4-223ENST00000493695 HVCN1Q96D96 273 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 ELP4Q96EB1 424 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 LINC00479Q96M42 142 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 ESRP2Q9H6T0 727 aaKnown RBP3.93□□□□□ -1.78
SMC4-223ENST00000493695 MKKSQ9NPJ1 570 aaPredicted RBP3.93□□□□□ -1.78
SMC4-223ENST00000493695 SLC7A10Q9NS82 523 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 MRPS28Q9Y2Q9 187 aaKnown RBP3.93□□□□□ -1.78
SMC4-223ENST00000493695 FAM96BQ9Y3D0 163 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 CYP46A1Q9Y6A2 500 aa3.93□□□□□ -1.78
SMC4-223ENST00000493695 A0A0J9YWU9 116 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 TMEM202A6NGA9 273 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 A6NLC8 198 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 J3KRW8 73 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 ZNHIT1O43257 154 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 GUCY1B2O75343 617 aa3.92□□□□□ -1.78
SMC4-223ENST00000493695 SORBS2O94875 1100 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms