RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 AGMOQ6ZNB7 445 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 CDHR3Q6ZTQ4 885 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SLC37A3Q8NCC5 494 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 RORBQ92753 470 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 LENG9Q96B70 501 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 ZDHHC15Q96MV8 337 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 DBNDD1Q9H9R9 158 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 COPZ2Q9P299 210 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 EIF3KQ9UBQ5 218 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 ANAPC7Q9UJX3 599 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SNX6Q9UNH7 406 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 ABCG2Q9UNQ0 655 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 MRPL11Q9Y3B7 192 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SNCAIPQ9Y6H5 919 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 TRBV23-1A0A0A0MS06 115 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 RGSL1A5PLK6 1076 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 C6orf229H3BNL8 230 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 TRIM38O00635 465 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 FSCN2O14926 492 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SSX4O60224 188 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 HMGB2P26583 209 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 HTR1BP28222 390 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 POLR2IP36954 125 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 CAPGP40121 348 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 TSPAN7P41732 249 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 IDH3AP50213 366 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 KNOP1Q1ED39 458 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 CYP27C1Q4G0S4 372 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 GPAT3Q53EU6 434 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 RUNDC3AQ59EK9 446 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 UBQLNLQ8IYU4 475 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SMG8Q8ND04 991 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 MCUQ8NE86 351 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 OR4D10Q8NGI6 311 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 URGCPQ8TCY9 931 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 TWNKQ96RR1 684 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 ACTR6Q9GZN1 396 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 RAVER2Q9HCJ3 691 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SLAMF7Q9NQ25 335 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM39AQ9NV64 488 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 AJAP1Q9UKB5 411 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 SCML1Q9UN30 329 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 MAGED2Q9UNF1 606 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 VPS9D1Q9Y2B5 631 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 EI24O14681 340 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 NRP1O14786 923 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 KLF11O14901 512 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 HOXA2O43364 376 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 FAM189A1O60320 539 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 UGT2B11O75310 529 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 CYP7B1O75881 506 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 SEC14L2O76054 403 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 INMTO95050 263 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 OAZ2O95190 189 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 VNN1O95497 513 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 TGM2P21980 687 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 RPS3P23396 243 aaKnown RBP eCLIP6.84□□□□□ -1.32
VPS13B-205ENST00000493587 ETV4P43268 484 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 MEOX2P50222 304 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 NCS1P62166 190 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 SLAMF1Q13291 335 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 STARD3Q14849 445 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 SIX1Q15475 284 aaPredicted RBP6.84□□□□□ -1.32
VPS13B-205ENST00000493587 TAB1Q15750 504 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 AKIRIN2Q53H80 203 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 STRIP1Q5VSL9 837 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 SEL1L3Q68CR1 1132 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 RASSF6Q6ZTQ3 369 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 PODNQ7Z5L7 613 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 FAM124AQ86V42 546 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 TSPYL5Q86VY4 417 aaPredicted RBP6.84□□□□□ -1.32
VPS13B-205ENST00000493587 RASAL3Q86YV0 1011 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 PLCZ1Q86YW0 608 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 OR8K5Q8NH50 307 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 TAS1R2Q8TE23 839 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 RSAD2Q8WXG1 361 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 USP7Q93009 1102 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 LPPQ93052 612 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 SPATA9Q9BWV2 254 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 ACSS3Q9H6R3 686 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 DUS2Q9NX74 493 aaKnown RBP6.84□□□□□ -1.32
VPS13B-205ENST00000493587 MBD2Q9UBB5 411 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 MFHAS1Q9Y4C4 1052 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 AFG3L2Q9Y4W6 797 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 SLC22A7Q9Y694 548 aa6.84□□□□□ -1.32
VPS13B-205ENST00000493587 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CLIC2O15247 247 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MAFO75444 373 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MED24O75448 989 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 SFTPCP11686 197 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 OGNP20774 298 aaKnown RBP6.83□□□□□ -1.32
VPS13B-205ENST00000493587 FASP25445 335 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 G0S2P27469 103 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 PRELPP51888 382 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 NAPAP54920 295 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 CCINQ13939 588 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 BCL7AQ4VC05 210 aa6.83□□□□□ -1.32
VPS13B-205ENST00000493587 MROH9Q5TGP6 573 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms