RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 BPTFQ12830 3046 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 BAHCC1Q9P281 2608 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 OR5K4A6NMS3 321 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 CASC3O15234 703 aaKnown RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 ASMTLO95671 621 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 SOD1P00441 154 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 JCHAINP01591 159 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 HGFP14210 728 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 AK4P27144 223 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 CD1CP29017 333 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 GJC1P36383 396 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 SLC1A1P43005 524 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 FASLGP48023 281 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 LIMK2P53671 638 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 OR1D5P58170 312 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 TAS2R40P59535 323 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 IFI35P80217 286 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 DSC2Q02487 901 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 GBE1Q04446 702 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 MESDQ14696 234 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 PDK1Q15118 436 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 ASTE1Q2TB18 679 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 LRRC38Q5VT99 294 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 CCDC70Q6NSX1 233 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 DOK6Q6PKX4 331 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 USP53Q70EK8 1073 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 NAGSQ8N159 534 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 ZNF843Q8N446 348 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 PQLC3Q8N755 202 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 LPCAT1Q8NF37 534 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 TTC9Q92623 222 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 SCAMP4Q969E2 229 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 MED8Q96G25 268 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 AHCYL2Q96HN2 611 aaKnown RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 TAAR9Q96RI9 348 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 DNAJC7Q99615 494 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
COL6A1-205ENST00000492851 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 SEMA6CQ9H3T2 930 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 KCNK4Q9NYG8 393 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 DTLQ9NZJ0 730 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 ZNHIT2Q9UHR6 403 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 CD84Q9UIB8 345 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 TMEM98Q9Y2Y6 226 aa12.38□□□□□ -0.43
COL6A1-205ENST00000492851 SMG1Q96Q15 3661 aaKnown RBP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 C1orf232A0A0U1RR37 186 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 PMS2P1A4D2B8 440 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 APOL1O14791 398 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 PPP1R12AO14974 1030 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 C1QL1O75973 258 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 CLDN7O95471 211 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 PRLP01236 227 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 PRB1P04280 392 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 ITGB2P05107 769 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 SFTPCP11686 197 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 SPINT3P49223 89 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 MAPK10P53779 464 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 MANEAQ5SRI9 462 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 TMEM71Q6P5X7 295 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 PCSK4Q6UW60 755 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 SFTPA2Q8IWL1 248 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 AGBL5Q8NDL9 886 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 OR10G6Q8NH81 332 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 SLC35G2Q8TBE7 412 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 USP7Q93009 1102 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 SGF29Q96ES7 293 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 SLC38A3Q99624 504 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 ZFYVE1Q9HBF4 777 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 RDH14Q9HBH5 336 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 DDX56Q9NY93 547 aaKnown RBP12.37□□□□□ -0.43
COL6A1-205ENST00000492851 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 PCDHGA3Q9Y5H0 932 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 LOC400499M0QZD8 3231 aa12.37□□□□□ -0.43
COL6A1-205ENST00000492851 COL27A1Q8IZC6 1860 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-205ENST00000492851 ASXL3Q9C0F0 2248 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 IGHV1OR21-1A0A087WYE8 117 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 LRRD1A4D1F6 860 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 STMND1H3BQB6 276 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 PPM1DO15297 605 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 INPP4BO15327 924 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 MTA2O94776 668 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 MAP3K6O95382 1288 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 ITIH1P19827 911 aa12.36□□□□□ -0.43
COL6A1-205ENST00000492851 CD86P42081 329 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms