RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 SDCCAG8Q86SQ7 713 aaPredicted RBP13.48□□□□□ -0.25
NUP188-208ENST00000491502 STK40Q8N2I9 435 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 DCAKDQ8WVC6 231 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 OR8D1Q8WZ84 308 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 MRRFQ96E11 262 aaKnown RBP13.48□□□□□ -0.25
NUP188-208ENST00000491502 OMDQ99983 421 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 EDEM2Q9BV94 578 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 SSU72Q9NP77 194 aaKnown RBP13.48□□□□□ -0.25
NUP188-208ENST00000491502 TREX1Q9NSU2 369 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 FBXL12Q9NXK8 326 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 PKP3Q9Y446 797 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 TNRC6BQ9UPQ9 1833 aaKnown RBP13.48□□□□□ -0.25
NUP188-208ENST00000491502 PI4KAP42356 2102 aa13.48□□□□□ -0.25
NUP188-208ENST00000491502 DMXL1Q9Y485 3027 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 LNP1A1A4G5 178 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 PATE3B3GLJ2 98 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 STX7O15400 261 aaKnown RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 RRP9O43818 475 aaKnown RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 BNIP3LO60238 219 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 ZNF821O75541 412 aaPredicted RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 VAPBO95292 243 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 SEMA4FO95754 770 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 PRLP01236 227 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 CFIP05156 583 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 SYPP08247 313 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 C5AR1P21730 350 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 XPAP23025 273 aaPredicted RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 SLC8A1P32418 973 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 HPDP32754 393 aaPredicted RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 SEPT7Q16181 437 aaKnown RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 CNGA3Q16281 694 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 QPCTQ16769 361 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 HSP90AA5PQ58FG0 334 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 FAM46CQ5VWP2 391 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 ZDHHC20Q5W0Z9 365 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 TCEAL6Q6IPX3 200 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 NEPROQ6NW34 567 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 TRMT10BQ6PF06 316 aaKnown RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 CES3Q6UWW8 571 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 GDPD4Q6W3E5 623 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 KDM7AQ6ZMT4 941 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 DPY19L3Q6ZPD9 716 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 Q6ZVU0 165 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 FAM124AQ86V42 546 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 CACUL1Q86Y37 369 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 CNTN4Q8IWV2 1026 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 OTUD6BQ8N6M0 293 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 OR6P1Q8NGX9 317 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 TCEAL3Q969E4 200 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 FCRL3Q96P31 734 aaPredicted RBP13.47□□□□□ -0.25
NUP188-208ENST00000491502 TTC1Q99614 292 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 ZDHHC6Q9H6R6 413 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 TMEM9BQ9NQ34 198 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 EURLQ9NYK6 297 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 NKIRAS1Q9NYS0 192 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 FZD4Q9ULV1 537 aa13.47□□□□□ -0.25
NUP188-208ENST00000491502 A0A0J9YYE9 177 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 A0A1B0GTW7 788 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 MID1O15344 667 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 LDB2O43679 373 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 GJB3O75712 270 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 IL1BP01584 269 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 TRBC1P01850 177 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 GCAP28676 217 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 ACSL1P33121 698 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 SUOXP51687 545 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 ACVR1Q04771 509 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 MSLNQ13421 630 aaPredicted RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 IHHQ14623 411 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 EFTUD2Q15029 972 aaKnown RBP eCLIP13.46□□□□□ -0.255e-8■■■□□ 18.2
NUP188-208ENST00000491502 AARS2Q5JTZ9 985 aaKnown RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 TEDDM1Q5T9Z0 273 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 ESRP1Q6NXG1 681 aaKnown RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 AFTPHQ6ULP2 937 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 PACS1Q6VY07 963 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 TIFABQ6ZNK6 161 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 STRA8Q7Z7C7 330 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 GALNT7Q86SF2 657 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 TRABD2AQ86V40 505 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 SRRM1Q8IYB3 904 aaKnown RBP13.46□□□□□ -0.25
NUP188-208ENST00000491502 OR2A12Q8NGT7 310 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 ACMSDQ8TDX5 336 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 PIH1D2Q8WWB5 315 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUP188-208ENST00000491502 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 PPP1R16AQ96I34 528 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 PLAC1Q9HBJ0 212 aa13.46□□□□□ -0.25
NUP188-208ENST00000491502 CAPN10Q9HC96 672 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms