RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CD320Q9NPF0 282 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 BFARQ9NZS9 450 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 HS3ST2Q9Y278 367 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 MAP3K13O43283 966 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 MTSS1O43312 755 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 AP2A1O95782 977 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 MPOP05164 745 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 POLR2EP19388 210 aaKnown RBP22.73■■□□□ 1.23
USF3-203ENST00000491165 CD72P21854 359 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 DHDDSQ86SQ9 333 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 SREK1Q8WXA9 508 aaKnown RBP22.73■■□□□ 1.23
USF3-203ENST00000491165 DNASE1L2Q92874 299 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 TRAPPC9Q96Q05 1148 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 CDH19Q9H159 772 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 ELOVL2Q9NXB9 296 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 DUSP12Q9UNI6 340 aa22.73■■□□□ 1.23
USF3-203ENST00000491165 TBC1D3BA6NDS4 549 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 HSPA4LO95757 839 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 UBTFL6P0CB48 400 aaPredicted RBP22.72■■□□□ 1.23
USF3-203ENST00000491165 FRG1Q14331 258 aaKnown RBP22.72■■□□□ 1.23
USF3-203ENST00000491165 DMC1Q14565 340 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 CFAP157Q5JU67 520 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 DGKKQ5KSL6 1271 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 FSTL4Q6MZW2 842 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 RETSATQ6NUM9 610 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 RAPH1Q70E73 1250 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 TMEM135Q86UB9 458 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 PLD6Q8N2A8 252 aaKnown RBP22.72■■□□□ 1.23
USF3-203ENST00000491165 SPATA22Q8NHS9 363 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 PYDC1Q8WXC3 89 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 SHCBP1LQ9BZQ2 653 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 SLC2A4RGQ9NR83 387 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 ERVW-1Q9UQF0 538 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 USP12O75317 370 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 PDE5AO76074 875 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 MT-CYBP00156 380 aaPredicted RBP22.72■■□□□ 1.23
USF3-203ENST00000491165 LYNP07948 512 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 PRDX6P30041 224 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 PON2Q15165 354 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 INO80DQ53TQ3 878 aaPredicted RBP22.72■■□□□ 1.23
USF3-203ENST00000491165 ZNF366Q8N895 744 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 DNAAF3Q8N9W5 541 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 SLC26A7Q8TE54 656 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 ASB2Q96Q27 587 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 PSKH2Q96QS6 385 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 VAT1Q99536 393 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 P2RY13Q9BPV8 354 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 TM6SF2Q9BZW4 377 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 MTG2Q9H4K7 406 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 COG4Q9H9E3 785 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 UBP1Q9NZI7 540 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 LHX3Q9UBR4 397 aa22.72■■□□□ 1.23
USF3-203ENST00000491165 A0A096LPK6 155 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 TMEM114B3SHH9 223 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 ITGAXP20702 1163 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 DSC2Q02487 901 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 ASPHQ12797 758 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 CCNIQ14094 377 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 EPGNQ6UW88 154 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 ZNF781Q8N8C0 355 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 SPDYE1Q8NFV5 336 aaPredicted RBP22.71■■□□□ 1.23
USF3-203ENST00000491165 VOPP1Q96AW1 172 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 GBA3Q9H227 469 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 TNKS2Q9H2K2 1166 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 VCX3BQ9H321 246 aa22.71■■□□□ 1.23
USF3-203ENST00000491165 ZCWPW2A0A1B0GU75 182 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 K7EQS6 105 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 DCXO43602 365 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 CUL3Q13618 768 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 ZNF235Q14590 738 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 ANKRD20A4Q4UJ75 823 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 FRMD7Q6ZUT3 714 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 CLEC14AQ86T13 490 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 DEFB107AQ8IZN7 70 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 PHC3Q8NDX5 983 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 ARRDC2Q8TBH0 407 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 WFIKKN2Q8TEU8 576 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 ACOX2Q99424 681 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 AGAP2Q99490 1192 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 MGME1Q9BQP7 344 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 CINPQ9BW66 212 aaPredicted RBP22.7■■□□□ 1.23
USF3-203ENST00000491165 CASS4Q9NQ75 786 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 TRHDEQ9UKU6 1024 aa22.7■■□□□ 1.23
USF3-203ENST00000491165 WASH3PC4AMC7 463 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 G3V2L1 256 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 H2AFYO75367 372 aaKnown RBP22.7■■□□□ 1.22
USF3-203ENST00000491165 MMP2P08253 660 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 COX4I1P13073 169 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 CR2P20023 1033 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 GRIA2P42262 883 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 RFTN1Q14699 578 aaPredicted RBP22.7■■□□□ 1.22
USF3-203ENST00000491165 ATXN7L2Q5T6C5 722 aaPredicted RBP22.7■■□□□ 1.22
USF3-203ENST00000491165 SLC30A9Q6PML9 568 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 RALGPS2Q86X27 583 aaPredicted RBP22.7■■□□□ 1.22
USF3-203ENST00000491165 CCDC124Q96CT7 223 aaKnown RBP22.7■■□□□ 1.22
USF3-203ENST00000491165 GLOD4Q9HC38 313 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 SEPT3Q9UH03 358 aa22.7■■□□□ 1.22
USF3-203ENST00000491165 LOC100653049A0A140TA62 436 aa22.69■■□□□ 1.22
USF3-203ENST00000491165 ERI2A8K979 691 aaKnown RBP22.69■■□□□ 1.22
USF3-203ENST00000491165 TTC34A8MYJ7 566 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms