RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 CKMT1AP12532 417 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 CTSEP14091 401 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
VPS26A-207ENST00000490696 DCDC1P59894 354 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 PRPSAP1Q14558 356 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 ZCCHC8Q6NZY4 707 aaKnown RBP15.3■□□□□ 0.04
VPS26A-207ENST00000490696 LVRNQ6Q4G3 990 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 TRIM74Q86UV6 250 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 SDR16C5Q8N3Y7 309 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 TTC30BQ8N4P2 665 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 GPR26Q8NDV2 337 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 PTCD2Q8WV60 388 aaKnown RBP15.3■□□□□ 0.04
VPS26A-207ENST00000490696 RTP4Q96DX8 246 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 SCARF2Q96GP6 870 aaPredicted RBP15.3■□□□□ 0.04
VPS26A-207ENST00000490696 HIC2Q96JB3 615 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 FICDQ9BVA6 458 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 FSD1LQ9BXM9 530 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 CDH19Q9H159 772 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 TRABDQ9H4I3 376 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 CYP4F12Q9HCS2 524 aa15.3■□□□□ 0.04
VPS26A-207ENST00000490696 ATRXP46100 2492 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 FAM208BQ5VWN6 2430 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 FAM221BA6H8Z2 402 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 RFPL3O75679 317 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 SLC4A1P02730 911 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 IVLP07476 585 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 MYF5P13349 255 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 BPIP17213 487 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 HMGCLP35914 325 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 POLD2P49005 469 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 DAB2P98082 770 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 ILKQ13418 452 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 OLIG2Q13516 323 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 TCEA2Q15560 299 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 CCDC157Q569K6 752 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 C6orf132Q5T0Z8 1188 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 DHRS13Q6UX07 377 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 ARHGEF18Q6ZSZ5 1173 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 C1orf54Q8WWF1 131 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 PPP1R2P1Q96PQ5 205 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 TMEM168Q9H0V1 697 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 CARS2Q9HA77 564 aaKnown RBP15.29■□□□□ 0.04
VPS26A-207ENST00000490696 RAD18Q9NS91 495 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 HACD3Q9P035 362 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 MOSPD1Q9UJG1 213 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 KLK13Q9UKR3 277 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 NEUROG3Q9Y4Z2 214 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 ASXL3Q9C0F0 2248 aa15.29■□□□□ 0.04
VPS26A-207ENST00000490696 SCN8AQ9UQD0 1980 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 INPP4BO15327 924 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 METTL18O95568 372 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 CDK4P11802 303 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
VPS26A-207ENST00000490696 MSLNQ13421 630 aaPredicted RBP15.28■□□□□ 0.04
VPS26A-207ENST00000490696 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
VPS26A-207ENST00000490696 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 KCTD11Q693B1 232 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 TMPRSS7Q7RTY8 843 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 GKN2Q86XP6 184 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 SLC35F3Q8IY50 421 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 CCL4L1Q8NHW4 92 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 BLOC1S5Q8TDH9 187 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 APOL2Q9BQE5 337 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 NCKIPSDQ9NZQ3 722 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 IL17CQ9P0M4 197 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 DOLKQ9UPQ8 538 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 TMEM98Q9Y2Y6 226 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
VPS26A-207ENST00000490696 OAS3Q9Y6K5 1087 aaKnown RBP15.28■□□□□ 0.04
VPS26A-207ENST00000490696 PTPRBP23467 1997 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 CEP104O60308 925 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 FGGP02679 453 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 CXCR5P32302 372 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 GNPDA1P46926 289 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 DUSP3P51452 185 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-207ENST00000490696 SNX1Q13596 522 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 SPARCL1Q14515 664 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 CCNG2Q16589 344 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 P3H1Q32P28 736 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 PDPK2PQ6A1A2 396 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 DENND5AQ6IQ26 1287 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 DRICH1Q6PGQ1 229 aaPredicted RBP15.27■□□□□ 0.04
VPS26A-207ENST00000490696 GLT6D1Q7Z4J2 308 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 TRAM1L1Q8N609 369 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 GPBAR1Q8TDU6 330 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 SCG3Q8WXD2 468 aaKnown RBP15.27■□□□□ 0.04
VPS26A-207ENST00000490696 PLEKHG4BQ96PX9 1271 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 TBL1YQ9BQ87 522 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 ZSCAN5AQ9BUG6 496 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 SPATA16Q9BXB7 569 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 ARNT2Q9HBZ2 717 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 BPIFA1Q9NP55 256 aa15.27■□□□□ 0.04
VPS26A-207ENST00000490696 TRNAU1APQ9NX07 287 aaKnown RBP15.27■□□□□ 0.04
VPS26A-207ENST00000490696 TRMT1Q9NXH9 659 aaKnown RBP15.27■□□□□ 0.04
VPS26A-207ENST00000490696 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms