RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TRNAU1APQ9NX07 287 aaKnown RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 DDIT4Q9NX09 232 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 RAB20Q9NX57 234 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 FAM13BQ9NYF5 915 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 USP25Q9UHP3 1055 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 PADI1Q9ULC6 663 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 B3GNT3Q9Y2A9 372 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 SNX10Q9Y5X0 201 aa7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 MORC2Q9Y6X9 1032 aaPredicted RBP7.09□□□□□ -1.27
PDLIM1-203ENST00000490391 IGLV3-10A0A075B6K4 115 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 KLRC4O43908 158 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 NDUFA10O95299 355 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 MED26O95402 600 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 POP4O95707 220 aaKnown RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 PAEPP09466 180 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SPTBP11277 2137 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 GM2AP17900 193 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 BRD2P25440 801 aaKnown RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 HTR1EP28566 365 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 PTPN4P29074 926 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 NOS3P29474 1203 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 GTF2H1P32780 548 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 MMP12P39900 470 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 LIG3P49916 1009 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 MXI1P50539 228 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SUOXP51687 545 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 AMPD3Q01432 767 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 ILF3Q12906 894 aaKnown RBP eCLIP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 BIRC2Q13490 618 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 ZNF235Q14590 738 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 MYLK3Q32MK0 819 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 ATXN7L2Q5T6C5 722 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 GDPD4Q6W3E5 623 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 ZNF783Q6ZMS7 281 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SYVN1Q86TM6 617 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 CUZD1Q86UP6 607 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 KCNMB4Q86W47 210 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 RYBPQ8N488 228 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 OR10G6Q8NH81 332 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SPATA3Q8NHX4 192 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SLC37A2Q8TED4 501 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SLC2A13Q96QE2 648 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 TRIM62Q9BVG3 475 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 GPR87Q9BY21 358 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 ZMYND15Q9H091 742 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 SIK2Q9H0K1 926 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 BLZF1Q9H2G9 400 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 GPR83Q9NYM4 423 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 MPP6Q9NZW5 540 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 COX16Q9P0S2 106 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 LNPEPQ9UIQ6 1025 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 FRMD4BQ9Y2L6 1034 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 PLEKHM1Q9Y4G2 1056 aa7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 NCOA6Q14686 2063 aaPredicted RBP7.08□□□□□ -1.28
PDLIM1-203ENST00000490391 PVALEFA0A1B0GWK0 134 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 TSPAN11A1L157 253 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 E5RJQ4 531 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 KCNN4O15554 427 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 TIAF1O95411 115 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 F9P00740 461 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 CEACAM5P06731 702 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 FGF5P12034 268 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 PDIA4P13667 645 aaKnown RBP7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 OR1E1P30953 314 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 ACVRL1P37023 503 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 ART1P52961 327 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 SNRPD1P62314 119 aaKnown RBP7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 CDK17Q00537 523 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 ELP6Q0PNE2 266 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 MTA1Q13330 715 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 CUL4BQ13620 913 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 NFIL3Q16649 462 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 DUS1LQ6P1R4 473 aaKnown RBP7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 TMEM270Q6UE05 265 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 IGFL3Q6UXB1 125 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 Q6ZS92 163 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 TMEM110Q86TL2 294 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 DEFB106AQ8N104 65 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 SFRP1Q8N474 314 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 NCSTNQ92542 709 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 RELTQ969Z4 430 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 DHX58Q96C10 678 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 C14orf79Q96F83 325 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 HMCESQ96FZ2 354 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 AHCYL2Q96HN2 611 aaKnown RBP7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 MEGF10Q96KG7 1140 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 SLC38A3Q99624 504 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 FRMD8Q9BZ67 464 aaPredicted RBP7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 THAP9Q9H5L6 903 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 WDR26Q9H7D7 661 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 PCDH12Q9NPG4 1184 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 ST7Q9NRC1 585 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 C5AR2Q9P296 337 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms