RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 GPR63Q9BZJ6 419 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 MAGEE1Q9HCI5 957 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 THSD1Q9NS62 852 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 TAAR2Q9P1P5 351 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 LRIT1Q9P2V4 623 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 FAM153AQ9UHL3 310 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 APPL1Q9UKG1 709 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 TMEM98Q9Y2Y6 226 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 ENTPD2Q9Y5L3 495 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 RHPN2P1A8MT19 583 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 BTNL10A8MVZ5 291 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 APOC4-APOC2K7ER74 178 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 NTN3O00634 580 aaPredicted RBP17.34■□□□□ 0.37
SEC13-218ENST00000490283 PMPCBO75439 489 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 NDST3O95803 873 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 MT-CYBP00156 380 aaPredicted RBP17.34■□□□□ 0.37
SEC13-218ENST00000490283 APOC2P02655 101 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 ADCY8P40145 1251 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 ACTR1BP42025 376 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 VAV2P52735 878 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 PCBP4P57723 403 aaKnown RBP17.34■□□□□ 0.37
SEC13-218ENST00000490283 ACTR1AP61163 376 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 CCL7P80098 99 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 CTBSQ01459 385 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 LRP8Q14114 963 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 HLTFQ14527 1009 aaKnown RBP eCLIP17.34■□□□□ 0.37
SEC13-218ENST00000490283 COL28A1Q2UY09 1125 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
SEC13-218ENST00000490283 BBS12Q6ZW61 710 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 GAS2L3Q86XJ1 694 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 SPATA22Q8NHS9 363 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 WDR36Q8NI36 951 aaKnown RBP17.34■□□□□ 0.37
SEC13-218ENST00000490283 HTR3CQ8WXA8 447 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 KRT35Q92764 455 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 SCARF2Q96GP6 870 aaPredicted RBP17.34■□□□□ 0.37
SEC13-218ENST00000490283 TMEM74Q96NL1 305 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 QKIQ96PU8 341 aaKnown RBP eCLIP17.34■□□□□ 0.37
SEC13-218ENST00000490283 TRIB3Q96RU7 358 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 AGAP2Q99490 1192 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 SPATA16Q9BXB7 569 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 HEMGNQ9BXL5 484 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 LRRN3Q9H3W5 708 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 VPS18Q9P253 973 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 IMPACTQ9P2X3 320 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 SATB2Q9UPW6 733 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 SHOC2Q9UQ13 582 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 ZNF711Q9Y462 761 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 PCDHA3Q9Y5H8 950 aa17.34■□□□□ 0.37
SEC13-218ENST00000490283 LRP4O75096 1905 aa17.33■□□□□ 0.37
SEC13-218ENST00000490283 ANKRD11Q6UB99 2663 aaPredicted RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 CCDC187A0A096LP49 1063 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 D6RAR5 112 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 H7C0C1 242 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 TLX3O43711 291 aaPredicted RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 DXOO77932 396 aaKnown RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 PTMAP06454 111 aaKnown RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 PIRTP0C851 137 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 NFKB1P19838 968 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 AK4P27144 223 aaPredicted RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 EIF2S3P41091 472 aaKnown RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 ATP5OP48047 213 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 RWDD2BP57060 319 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ERVPABLB-1P60509 514 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 XRCC4Q13426 336 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ZNF569Q5MCW4 686 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 FOXR1Q6PIV2 292 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 RAD9BQ6WBX8 426 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 NRROSQ86YC3 692 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ARL14Q8N4G2 192 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ZNF248Q8NDW4 579 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ACRBPQ8NEB7 543 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 TADA1Q96BN2 335 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 COX14Q96I36 57 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ZSCAN5AQ9BUG6 496 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 RMI1Q9H9A7 625 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 EPB41L5Q9HCM4 733 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 SPATS2LQ9NUQ6 558 aaKnown RBP17.33■□□□□ 0.36
SEC13-218ENST00000490283 UBP1Q9NZI7 540 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 ZNHIT2Q9UHR6 403 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 RABGEF1Q9UJ41 708 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 TRHDEQ9UKU6 1024 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 RNF215Q9Y6U7 377 aa17.33■□□□□ 0.36
SEC13-218ENST00000490283 RCCD1A6NED2 376 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 STK10O94804 968 aaKnown RBP17.32■□□□□ 0.36
SEC13-218ENST00000490283 FUCA1P04066 466 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 FGF1P05230 155 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 CDC25BP30305 580 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 INHBCP55103 352 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 DCDC1P59894 354 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 ADCY2Q08462 1091 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 WASHC5Q12768 1159 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 KIF5AQ12840 1032 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 EIF3IQ13347 325 aaKnown RBP17.32■□□□□ 0.36
SEC13-218ENST00000490283 PYCR3Q53H96 274 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 ALS2CLQ60I27 953 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 SPRED1Q7Z699 444 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 SYCE1Q8N0S2 351 aa17.32■□□□□ 0.36
SEC13-218ENST00000490283 LIN37Q96GY3 246 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms