RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 SPDYCQ5MJ68 293 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 TRMT10BQ6PF06 316 aaKnown RBP10.85□□□□□ -0.67
TFF3-203ENST00000489676 KDM7AQ6ZMT4 941 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 GCNT7Q6ZNI0 430 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 CEP128Q6ZU80 1094 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
TFF3-203ENST00000489676 PLA2G15Q8NCC3 412 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 C1orf216Q8TAB5 229 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 DNASE2BQ8WZ79 361 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 KLK6Q92876 244 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 HDAC10Q969S8 669 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 AP2M1Q96CW1 435 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 CFAP36Q96G28 342 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 HSPA12BQ96MM6 686 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 AGAP2Q99490 1192 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 RIOK2Q9BVS4 552 aaKnown RBP10.85□□□□□ -0.67
TFF3-203ENST00000489676 FUT8Q9BYC5 575 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 EPB41L4BQ9H329 900 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 FAM83DQ9H4H8 585 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 SUDS3Q9H7L9 328 aaPredicted RBP10.85□□□□□ -0.67
TFF3-203ENST00000489676 LRRC4CQ9HCJ2 640 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 FZD3Q9NPG1 666 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 MBNL1Q9NR56 388 aaKnown RBP10.85□□□□□ -0.67
TFF3-203ENST00000489676 KCTD5Q9NXV2 234 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 APPL1Q9UKG1 709 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 TMPRSS11EQ9UL52 423 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 DMTF1Q9Y222 760 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 GON4LQ3T8J9 2241 aa10.85□□□□□ -0.67
TFF3-203ENST00000489676 CACNA1EQ15878 2313 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 GLYATL1P3A0A0U1RQE8 302 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 OR51F1A6NGY5 319 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SLC31A1O15431 190 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SRP72O76094 671 aaKnown RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 PAK4O96013 591 aaPredicted RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 GOT2P00505 430 aaKnown RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 GSTA2P09210 222 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 TSHRP16473 764 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 HNRNPA2B1P22626 353 aaKnown RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 MCM3P25205 808 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 CD27P26842 260 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SSTR1P30872 391 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 MC4RP32245 332 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 TRIM23P36406 574 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 PTGER3P43115 390 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 TMPRSS15P98073 1019 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 TCF15Q12870 199 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SGCGQ13326 291 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 NFATC2Q13469 925 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SEMA3AQ14563 771 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SLMAPQ14BN4 828 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 LRRC14Q15048 493 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 CHRNA6Q15825 494 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 ATP13A5Q4VNC0 1218 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 ALS2CLQ60I27 953 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 PDPK2PQ6A1A2 396 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 EMBQ6PCB8 327 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 AFTPHQ6ULP2 937 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 FAM151BQ6UXP7 276 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 ABI3BPQ7Z7G0 1075 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 PIANPQ8IYJ0 282 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 TMEFF1Q8IYR6 380 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 UNC5BQ8IZJ1 945 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 TRAM1L1Q8N609 369 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 PRSS33Q8NF86 280 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 GSDMBQ8TAX9 411 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 PYROXD1Q8WU10 500 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 CAVIN3Q969G5 261 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 CERS2Q96G23 380 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 VPS35Q96QK1 796 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 ZSCAN5AQ9BUG6 496 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 C1QTNF7Q9BXJ2 289 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 SEMA4AQ9H3S1 761 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 GPR27Q9NS67 375 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 MOCS1Q9NZB8 636 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 IL1RAPL1Q9NZN1 696 aa10.84□□□□□ -0.67
TFF3-203ENST00000489676 MARCH4Q9P2E8 410 aaPredicted RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 CNOT6Q9ULM6 557 aaKnown RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.84□□□□□ -0.67
TFF3-203ENST00000489676 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 POM121BA6NF01 834 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 SPAG6O75602 509 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 VAPBO95292 243 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 PCCBP05166 539 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 PRSS56P0CW18 603 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 PAMP19021 973 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 AKT2P31751 481 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 CDKN1CP49918 316 aaPredicted RBP10.83□□□□□ -0.68
TFF3-203ENST00000489676 PFN3P60673 137 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 PRAMEP78395 509 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 UAP1Q16222 522 aaPredicted RBP10.83□□□□□ -0.68
TFF3-203ENST00000489676 KYNUQ16719 465 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 LONRF1Q17RB8 773 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 TYSND1Q2T9J0 566 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 PSAPL1Q6NUJ1 521 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 PNCKQ6P2M8 343 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 ZNF449Q6P9G9 518 aa10.83□□□□□ -0.68
TFF3-203ENST00000489676 ADAMTSL4Q6UY14 1074 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms