RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PYCR3Q53H96 274 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 BOLA3Q53S33 107 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 RALGPS1Q5JS13 557 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ARMC12Q5T9G4 340 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 MARC1Q5VT66 337 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 DOK6Q6PKX4 331 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 PIM3Q86V86 326 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ZNF761Q86XN6 746 aaPredicted RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 PAF1Q8N7H5 531 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 ARRDC2Q8TBH0 407 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 TEKT4Q8WW24 435 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 JPH3Q8WXH2 748 aaPredicted RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 MAML1Q92585 1016 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 IQCDQ96DY2 449 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 COX14Q96I36 57 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 SEMA3CQ99985 751 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 CNOT6Q9ULM6 557 aaKnown RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 NENFQ9UMX5 172 aa11.7□□□□□ -0.54
ACTN4-206ENST00000489451 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 SPENQ96T58 3664 aaKnown RBP11.7□□□□□ -0.54
ACTN4-206ENST00000489451 A0A087X0T9 212 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GOLGA6CA6NDK9 693 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GOLGA6BA6NDN3 693 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 RHPN2P1A8MT19 583 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 HGSO14964 777 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-206ENST00000489451 DNAJC6O75061 913 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 ITGB2P05107 769 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 CYP1A2P05177 515 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 FAM228BP0C875 321 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GOLGA6DP0CG33 693 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GARSP41250 739 aaKnown RBP11.69□□□□□ -0.54
ACTN4-206ENST00000489451 ACTR1BP42025 376 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GPR3P46089 330 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GPR1P46091 355 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 STC1P52823 247 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 CDH6P55285 790 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 ACTR1AP61163 376 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GALNT2Q10471 571 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 SQSTM1Q13501 440 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 DPYSL3Q14195 570 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 PIGHQ14442 188 aaPredicted RBP11.69□□□□□ -0.54
ACTN4-206ENST00000489451 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 MANEAQ5SRI9 462 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 ADAMTSL4Q6UY14 1074 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 ATG14Q6ZNE5 492 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 USP45Q70EL2 814 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 BMPERQ8N8U9 685 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 SLC37A2Q8TED4 501 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 NKD1Q969G9 470 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 OR2M4Q96R27 311 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 SLC12A9Q9BXP2 914 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 TDRD1Q9BXT4 1180 aaKnown RBP11.69□□□□□ -0.54
ACTN4-206ENST00000489451 B3GNT4Q9C0J1 378 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 OCIAD1Q9NX40 245 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 GOLGA6AQ9NYA3 693 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 ANAPC7Q9UJX3 599 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 PCDHGA3Q9Y5H0 932 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 B3GALT1Q9Y5Z6 326 aa11.69□□□□□ -0.54
ACTN4-206ENST00000489451 TLN1Q9Y490 2541 aaKnown RBP11.68□□□□□ -0.54
ACTN4-206ENST00000489451 A6NCN8 305 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 FADS2P1A8MWK0 482 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 HLA-DQB2P05538 268 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 MMP2P08253 660 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 FASLGP48023 281 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 TAS2R40P59535 323 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 PAFAH1B3Q15102 231 aaKnown RBP11.68□□□□□ -0.54
ACTN4-206ENST00000489451 CLPPQ16740 277 aaPredicted RBP11.68□□□□□ -0.54
ACTN4-206ENST00000489451 MARK2Q7KZI7 788 aaKnown RBP11.68□□□□□ -0.54
ACTN4-206ENST00000489451 ZNF765Q7L2R6 523 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 OR4D9Q8NGE8 314 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 AP2M1Q96CW1 435 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 EID2BQ96D98 161 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 NUP85Q9BW27 656 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 SPRY4Q9C004 299 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 KCTD5Q9NXV2 234 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 PDP2Q9P2J9 529 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 RCOR3Q9P2K3 495 aaPredicted RBP11.68□□□□□ -0.54
ACTN4-206ENST00000489451 CHKBQ9Y259 395 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 PRKAB1Q9Y478 270 aa11.68□□□□□ -0.54
ACTN4-206ENST00000489451 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
ACTN4-206ENST00000489451 TRBV23OR9-2A0A075B6M9 112 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 INPP4BO15327 924 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 CLDN7O95471 211 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 ATP1A1P05023 1023 aaKnown RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 LIFP15018 202 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 CD82P27701 267 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 SERPINB6P35237 376 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 UGT1A3P35503 534 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 SLC10A2Q12908 348 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 TDRD12Q587J7 1177 aaKnown RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 HENMT1Q5T8I9 393 aaKnown RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 NLRP8Q86W28 1048 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 PQLC3Q8N755 202 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 ART4Q93070 314 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms