RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BROXQ5VW32 411 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 C19orf48Q6RUI8 117 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 B4GALNT4Q76KP1 1039 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PID1Q7Z2X4 250 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TECPR1Q7Z6L1 1165 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TRIM74Q86UV6 250 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PHYKPLQ8IUZ5 450 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 CCNJLQ8IV13 435 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 IPMKQ8NFU5 416 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 GDAP1Q8TB36 358 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ZDHHC1Q8WTX9 485 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 HNRNPLLQ8WVV9 542 aaKnown RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 FGF11Q92914 225 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TEKT5Q96M29 485 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TTC25Q96NG3 672 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PPP1R2P1Q96PQ5 205 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 QKIQ96PU8 341 aaKnown RBP eCLIP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 ZSCAN5AQ9BUG6 496 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 FRMD8Q9BZ67 464 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TSGA10Q9BZW7 698 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 POLR1BQ9H9Y6 1135 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 THSD1Q9NS62 852 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 UBP1Q9NZI7 540 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 TAAR2Q9P1P5 351 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 LRIT1Q9P2V4 623 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PNMA8BQ9ULN7 279 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-232ENST00000489053 LHX6Q9UPM6 363 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 PCDHB1Q9Y5F3 818 aa9.08□□□□□ -0.96
HDAC6-232ENST00000489053 LY6G6EA0A0G2JKS1 128 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 A0A0U1RQS6 177 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 EIF4E1BA6NMX2 242 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 MIF4GDA9UHW6 222 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 ANXA9O76027 345 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 MPOP05164 745 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 PIRTP0C851 137 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 JMJD7P0C870 316 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 VCLP18206 1134 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 NFKB1P19838 968 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 ALDH4A1P30038 563 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 CTNNA1P35221 906 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 ADCY8P40145 1251 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 MARCKSL1P49006 195 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 SPINT3P49223 89 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 GSDMDP57764 484 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 EIF3EP60228 445 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 CTBSQ01459 385 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 XRCC4Q13426 336 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 RTP5Q14D33 572 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 CERCAMQ5T4B2 595 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 CDCP2Q5VXM1 449 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 DARS2Q6PI48 645 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 BBS12Q6ZW61 710 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 GLT6D1Q7Z4J2 308 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 NLRP8Q86W28 1048 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 JAMLQ86YT9 394 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 SLC25A41Q8N5S1 370 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 CNTD1Q8N815 330 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 SPATA22Q8NHS9 363 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 WDR36Q8NI36 951 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 KRT35Q92764 455 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 ATXN7L3BQ96GX2 97 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 ZNF578Q96N58 590 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 TMEM74Q96NL1 305 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 SMIM14Q96QK8 99 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 LYSMD1Q96S90 227 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 OSBPL8Q9BZF1 889 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 MAGEE1Q9HCI5 957 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.07□□□□□ -0.96
HDAC6-232ENST00000489053 HACD3Q9P035 362 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 SLC17A4Q9Y2C5 497 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 PKP3Q9Y446 797 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 ZNF711Q9Y462 761 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 U3KQA8 63 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 KNTC1P50748 2209 aa9.07□□□□□ -0.96
HDAC6-232ENST00000489053 WDFY3Q8IZQ1 3526 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CCDC187A0A096LP49 1063 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 BTNL10A8MVZ5 291 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 D6RAR5 112 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 KCNN4O15554 427 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 NUDT21O43809 227 aaKnown RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 SNX2O60749 519 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 SLC25A14O95258 325 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 MT-CYBP00156 380 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 PRLP01236 227 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 ATP1A1P05023 1023 aaKnown RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 MMP2P08253 660 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 GM2AP17900 193 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 HLA-DPA1P20036 260 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 AK4P27144 223 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 LSSP48449 732 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 GEMP55040 296 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 INHBCP55103 352 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 WNT3AP56704 352 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CCL7P80098 99 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CCDC173Q0VFZ6 552 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 EIF3IQ13347 325 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms