RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TMC3Q7Z5M5 1100 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 SLC25A41Q8N5S1 370 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 ARL10Q8N8L6 244 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 FAM46DQ8NEK8 389 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 OR6C4Q8NGE1 309 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 MAPK15Q8TD08 544 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 SPATA16Q9BXB7 569 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 FRMD8Q9BZ67 464 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-218ENST00000489037 GBA3Q9H227 469 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 TRNAU1APQ9NX07 287 aaKnown RBP14.21□□□□□ -0.13
BRCA1-218ENST00000489037 SIRPGQ9P1W8 387 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 PADI4Q9UM07 663 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 GPSM3Q9Y4H4 160 aa14.21□□□□□ -0.13
BRCA1-218ENST00000489037 MAP1BP46821 2468 aaKnown RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 EME2A4GXA9 379 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 C1QTNF9BB2RNN3 333 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 FGF1P05230 155 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 PROS1P07225 676 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 IVLP07476 585 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 CELA2BP08218 269 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 C1QTNF9P0C862 333 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 MYF5P13349 255 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 CCZ1BP86790 482 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 CCZ1P86791 482 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 SIRPB2Q5JXA9 342 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 ZNF569Q5MCW4 686 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 HENMT1Q5T8I9 393 aaKnown RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 ZDHHC20Q5W0Z9 365 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 ALS2CLQ60I27 953 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 SLC35F3Q8IY50 421 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 TRIM58Q8NG06 486 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 GATA6Q92908 595 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 OXNAD1Q96HP4 312 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 MRGPRX2Q96LB1 330 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 SPATA13Q96N96 652 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 ZSCAN5AQ9BUG6 496 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 FRMD8P1Q9BZ68 369 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-218ENST00000489037 TMEM168Q9H0V1 697 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 DPEP2Q9H4A9 486 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 SUFUQ9UMX1 484 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 CLCA2Q9UQC9 943 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 SLC17A4Q9Y2C5 497 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 TMEM98Q9Y2Y6 226 aa14.2□□□□□ -0.14
BRCA1-218ENST00000489037 FAM149AA5PLN7 773 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 OPA1O60313 960 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 MT-CO3P00414 261 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 SOD1P00441 154 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 POLD2P49005 469 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 DCDC1P59894 354 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 INSM1Q01101 510 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-218ENST00000489037 BIRC2Q13490 618 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 SLC1A5Q15758 541 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 MEI1Q5TIA1 1274 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 PDPK2PQ6A1A2 396 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 GUSBP11Q6P575 273 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 GLT6D1Q7Z4J2 308 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 GALNT13Q8IUC8 556 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 CACTIN-AS1Q8N1I8 211 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 TRAM1L1Q8N609 369 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 PDCD7Q8N8D1 485 aaKnown RBP14.19□□□□□ -0.14
BRCA1-218ENST00000489037 WDR48Q8TAF3 677 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 CCDC110Q8TBZ0 833 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 BLOC1S5Q8TDH9 187 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 OR2M4Q96R27 311 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 AGAP2Q99490 1192 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.19□□□□□ -0.14
BRCA1-218ENST00000489037 VPS18Q9P253 973 aa14.19□□□□□ -0.14
BRCA1-218ENST00000489037 LY6G6EA0A0G2JKS1 128 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 C5orf60A6NFR6 353 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 PSMD3O43242 534 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 SLC25A14O95258 325 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-218ENST00000489037 PSMB4P28070 264 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 ACTN2P35609 894 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 ADCY8P40145 1251 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 TARDBPQ13148 414 aaKnown RBP eCLIP14.18□□□□□ -0.14
BRCA1-218ENST00000489037 KLF1Q13351 362 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-218ENST00000489037 ST3GAL2Q16842 350 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 PARP6Q2NL67 630 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 NYAP1Q6ZVC0 841 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 MARK2Q7KZI7 788 aaKnown RBP14.18□□□□□ -0.14
BRCA1-218ENST00000489037 TRIM74Q86UV6 250 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 SLC13A5Q86YT5 568 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-218ENST00000489037 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 GPBAR1Q8TDU6 330 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 MAIP1Q8WWC4 291 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 COX14Q96I36 57 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 DEPDC7Q96QD5 511 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 CARD9Q9H257 536 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 RMI1Q9H9A7 625 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 BPIFA1Q9NP55 256 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 NFKBIL1Q9UBC1 381 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-218ENST00000489037 ZNHIT2Q9UHR6 403 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 PPP2R2CQ9Y2T4 447 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 PKP3Q9Y446 797 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 SPO11Q9Y5K1 396 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 U3KQA8 63 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 SCN8AQ9UQD0 1980 aa14.18□□□□□ -0.14
BRCA1-218ENST00000489037 C2orf81A6NN90 581 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms