RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TAF1AQ15573 450 aaPredicted RBP18.55■□□□□ 0.56
PTCD3-217ENST00000488801 ZNF542PQ5EBM4 170 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 PDPK2PQ6A1A2 396 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 GLRX5Q86SX6 157 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 RBFAQ8N0V3 343 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 TRAM1L1Q8N609 369 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 OR56A4Q8NGH8 313 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 BRSK1Q8TDC3 778 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 OR1E3Q8WZA6 343 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 SLCO2A1Q92959 643 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 MAGOHBQ96A72 148 aaKnown RBP18.55■□□□□ 0.56
PTCD3-217ENST00000488801 ZSCAN5AQ9BUG6 496 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 UCKL1Q9NWZ5 548 aa18.55■□□□□ 0.56
PTCD3-217ENST00000488801 NCOR2Q9Y618 2525 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 DCDC2BA2VCK2 349 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 H3BM21 787 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 LDB2O43679 373 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 SDC3O75056 442 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 PPFIA2O75334 1257 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 KCNK5O95279 499 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 CEACAM5P06731 702 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 CEACAM1P13688 526 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 JUNDP17535 347 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 KELP23276 732 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 PSMA3P25788 255 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 CCDC137Q6PK04 289 aaKnown RBP18.54■□□□□ 0.56
PTCD3-217ENST00000488801 ENPP7Q6UWV6 458 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 TAB3Q8N5C8 712 aaPredicted RBP18.54■□□□□ 0.56
PTCD3-217ENST00000488801 DEFB124Q8NES8 71 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 BTN2A2Q8WVV5 523 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 CAMK1GQ96NX5 476 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 RAB6BQ9NRW1 208 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 KLQ9UEF7 1012 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 APOBEC3BQ9UH17 382 aaKnown RBP18.54■□□□□ 0.56
PTCD3-217ENST00000488801 ARL5AQ9Y689 179 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 CSNK1G3Q9Y6M4 447 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 KNTC1P50748 2209 aa18.54■□□□□ 0.56
PTCD3-217ENST00000488801 UNC13CQ8NB66 2214 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 GOLGA6L10A0A0M3HER8 536 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 PRSS38A1L453 326 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 PDE2AO00408 941 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-217ENST00000488801 RASGRP1O95267 797 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 SLC4A1P02730 911 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 FUCA1P04066 466 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 SRP54P61011 504 aaKnown RBP18.53■□□□□ 0.56
PTCD3-217ENST00000488801 PPARDQ03181 441 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 ZDHHC20Q5W0Z9 365 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 OR4C6Q8NH72 309 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 PTCD2Q8WV60 388 aaKnown RBP18.53■□□□□ 0.56
PTCD3-217ENST00000488801 TSACCQ96A04 125 aaPredicted RBP18.53■□□□□ 0.56
PTCD3-217ENST00000488801 LRRC45Q96CN5 670 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 HIC2Q96JB3 615 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 VPS35Q96QK1 796 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 IL26Q9NPH9 171 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 CASS4Q9NQ75 786 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 PCYOX1Q9UHG3 505 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 TMPRSS11EQ9UL52 423 aa18.53■□□□□ 0.56
PTCD3-217ENST00000488801 GIPC1O14908 333 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 SCAMP1O15126 338 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 IVLP07476 585 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 TPSB2P20231 275 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 LPOP22079 712 aaPredicted RBP18.52■□□□□ 0.56
PTCD3-217ENST00000488801 SPAM1P38567 509 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 GRIA1P42261 906 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 BLKP51451 505 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 CDH17Q12864 832 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 KCNJ11Q14654 390 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 TPSAB1Q15661 275 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 INAVAQ3KP66 663 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 ZNF534Q76KX8 674 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 OR52K1Q8NGK4 314 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 CLPBQ9H078 707 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 BPIFA1Q9NP55 256 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 MRPL40Q9NQ50 206 aaKnown RBP18.52■□□□□ 0.56
PTCD3-217ENST00000488801 SMOXQ9NWM0 555 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 NLGN3Q9NZ94 848 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTCD3-217ENST00000488801 VPS18Q9P253 973 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 RNF14Q9UBS8 474 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 KCTD3Q9Y597 815 aa18.52■□□□□ 0.56
PTCD3-217ENST00000488801 OAS3Q9Y6K5 1087 aaKnown RBP18.52■□□□□ 0.56
PTCD3-217ENST00000488801 AGAP14A8MT82 685 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 TRIM38O00635 465 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 AQP9O43315 295 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 DKK1O94907 266 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 APRTP07741 180 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 NOVA1P51513 510 aaKnown RBP18.51■□□□□ 0.55
PTCD3-217ENST00000488801 PDE1BQ01064 536 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 PTPRCAPQ14761 206 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 KCTD19Q17RG1 926 aaPredicted RBP18.51■□□□□ 0.55
PTCD3-217ENST00000488801 ALS2CLQ60I27 953 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 PSAPL1Q6NUJ1 521 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 GSTA5Q7RTV2 222 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 TRIM74Q86UV6 250 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 FSTL5Q8N475 847 aaPredicted RBP18.51■□□□□ 0.55
PTCD3-217ENST00000488801 CAPZA3Q96KX2 299 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 SPATA16Q9BXB7 569 aa18.51■□□□□ 0.55
PTCD3-217ENST00000488801 DDX47Q9H0S4 455 aaKnown RBP18.51■□□□□ 0.55
PTCD3-217ENST00000488801 SLC32A1Q9H598 525 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms