RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SUFUQ9UMX1 484 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 GOLGA4Q13439 2230 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 CPED1A4D0V7 1026 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 INPP4BO15327 924 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 KCNN4O15554 427 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 JUPP14923 745 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 ADRA1AP35348 466 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 DCDC1P59894 354 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 TARDBPQ13148 414 aaKnown RBP eCLIP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 SLC1A5Q15758 541 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 PERM1Q5SV97 790 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 MEI1Q5TIA1 1274 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 CDCP2Q5VXM1 449 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 CCDC70Q6NSX1 233 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 EFL1Q7Z2Z2 1120 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 TAF8Q7Z7C8 310 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 SFTPA2Q8IWL1 248 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 KLHDC8BQ8IXV7 354 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 TTC30BQ8N4P2 665 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 SLC25A41Q8N5S1 370 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 ARL10Q8N8L6 244 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 KYQ8NBH2 561 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 TTC13Q8NBP0 860 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 GPR156Q8NFN8 814 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 CCDC110Q8TBZ0 833 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 SCG3Q8WXD2 468 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 SRPK1Q96SB4 655 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 GPR63Q9BZJ6 419 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 TRNAU1APQ9NX07 287 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 NFKBIL1Q9UBC1 381 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 MOSPD1Q9UJG1 213 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 PADI4Q9UM07 663 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 GPR34Q9UPC5 381 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 DOLKQ9UPQ8 538 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 PCYT1BQ9Y5K3 369 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 OAS3Q9Y6K5 1087 aaKnown RBP15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 AKAP13Q12802 2813 aa15.85■□□□□ 0.13
CTDSP1-209ENST00000488627 TRABD2BA6NFA1 517 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 C5orf60A6NFR6 353 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 CASC3O15234 703 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 NOBOXO60393 691 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 DNAJC6O75061 913 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 ANXA9O76027 345 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 AGTP01019 485 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 BPIP17213 487 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 GNPDA1P46926 289 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 RPIAP49247 311 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 MSLNQ13421 630 aaPredicted RBP15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 PYCR3Q53H96 274 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 ITPRIPL1Q6GPH6 555 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 RANBP10Q6VN20 620 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 DCBLD1Q8N8Z6 715 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 FAM46DQ8NEK8 389 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 IPMKQ8NFU5 416 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 GLMNQ92990 594 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 FERMT1Q9BQL6 677 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 CDH19Q9H159 772 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 TRABDQ9H4I3 376 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 LZTFL1Q9NQ48 299 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 SPATS2LQ9NUQ6 558 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 EVA1BQ9NVM1 165 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 SIRPGQ9P1W8 387 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 GULP1Q9UBP9 304 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 PLEKHM1Q9Y4G2 1056 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 EPG5Q9HCE0 2579 aa15.84■□□□□ 0.13
CTDSP1-209ENST00000488627 TMEM8BA6NDV4 472 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 GOLGA6L9A6NEM1 432 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 MT-CO3P00414 261 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 ATP1A1P05023 1023 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 HLA-DPA1P20036 260 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 PSMB4P28070 264 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 HMGCLP35914 325 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 ADCY8P40145 1251 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 GEMP55040 296 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 DOK6Q6PKX4 331 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 C17orf82Q86X59 251 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 FAM71DQ8N9W8 422 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 NAT6Q93015 286 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 SUDS3Q9H7L9 328 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 VPS18Q9P253 973 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 RABGEF1Q9UJ41 708 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 TMPRSS11EQ9UL52 423 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 CLCA2Q9UQC9 943 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 PPP2R2CQ9Y2T4 447 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 PLXNB3Q9ULL4 1909 aa15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 MAP1BP46821 2468 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-209ENST00000488627 FREM2Q5SZK8 3169 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 ASXL3Q9C0F0 2248 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 TAF4O00268 1085 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 STK10O94804 968 aaKnown RBP15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 FGF1P05230 155 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 AK4P27144 223 aaPredicted RBP15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 GDF10P55107 478 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 CTBSQ01459 385 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 OLIG2Q13516 323 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 RPS6KA1Q15418 735 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 ST3GAL2Q16842 350 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 ALS2CLQ60I27 953 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 DENND5AQ6IQ26 1287 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms