RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TRIM38O00635 465 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 AURKAO14965 403 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 INPP4BO15327 924 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PPFIA2O75334 1257 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 ASMTLO95671 621 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 CRTAMO95727 393 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 SOD1P00441 154 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 CEACAM5P06731 702 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 CKMT2P17540 419 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 DUSP3P51452 185 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 GNG11P61952 73 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PDE1BQ01064 536 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 ALS2CLQ60I27 953 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PDPK2PQ6A1A2 396 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 ZCCHC8Q6NZY4 707 aaKnown RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 DOK6Q6PKX4 331 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 LVRNQ6Q4G3 990 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 LINC00523Q86TU6 105 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 RASGEF1CQ8N431 466 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 TRAM1L1Q8N609 369 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PDCD7Q8N8D1 485 aaKnown RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 GPR26Q8NDV2 337 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PDXPQ96GD0 296 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PLEKHG4BQ96PX9 1271 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 WDR24Q96S15 920 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 OSBPL9Q96SU4 736 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 AGAP2Q99490 1192 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 APOL2Q9BQE5 337 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 LRRC61Q9BV99 259 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 FRMD8Q9BZ67 464 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 CARS2Q9HA77 564 aaKnown RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 ARNT2Q9HBZ2 717 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 BPIFA1Q9NP55 256 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 MRPL40Q9NQ50 206 aaKnown RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PAK5Q9P286 719 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 TTC7AQ9ULT0 858 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-207ENST00000488591 PYCARDQ9ULZ3 195 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 SLC17A4Q9Y2C5 497 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 DCHS1Q96JQ0 3298 aa14.97□□□□□ -0.01
CXCL12-207ENST00000488591 USP27XA6NNY8 438 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 PGRMC1O00264 195 aaKnown RBP14.96□□□□□ -0.01
CXCL12-207ENST00000488591 CES2O00748 559 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 YY2O15391 372 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 STX7O15400 261 aaKnown RBP14.96□□□□□ -0.01
CXCL12-207ENST00000488591 AP2A1O95782 977 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 GAS8O95995 478 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 IVLP07476 585 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 CDK4P11802 303 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 BPIP17213 487 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 FOXC1Q12948 553 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 SPARCL1Q14515 664 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 TAF1AQ15573 450 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-207ENST00000488591 DEFB133Q30KQ1 61 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 PROX2Q3B8N5 592 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 CCDC157Q569K6 752 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 KCTD11Q693B1 232 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 TAF8Q7Z7C8 310 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 KLHDC8BQ8IXV7 354 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 TTC30BQ8N4P2 665 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 TAB3Q8N5C8 712 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-207ENST00000488591 FAM181AQ8N9Y4 354 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 BRSK1Q8TDC3 778 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 CLPBQ9H078 707 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 CAAP1Q9H8G2 361 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 IL17CQ9P0M4 197 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 SNX12Q9UMY4 172 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 TMEM98Q9Y2Y6 226 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 PCDHGA1Q9Y5H4 931 aa14.96□□□□□ -0.01
CXCL12-207ENST00000488591 DNAH14Q0VDD8 3507 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 GOLGA6L10A0A0M3HER8 536 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 USP12O75317 370 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 SLC25A14O95258 325 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 GIMD1P0DJR0 217 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 TCP1P17987 556 aaKnown RBP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 LPOP22079 712 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 SPAM1P38567 509 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 GNPDA1P46926 289 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 POLD2P49005 469 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 RPIAP49247 311 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 ILF3Q12906 894 aaKnown RBP eCLIP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 ILKQ13418 452 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 OLIG2Q13516 323 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 PEX6Q13608 980 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 SLCO6A1Q86UG4 719 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 TRIM74Q86UV6 250 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 PNPLA1Q8N8W4 532 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 ACTRT1Q8TDG2 376 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 COX14Q96I36 57 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 MS4A14Q96JA4 679 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 APOLD1Q96LR9 279 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 GSDMCQ9BYG8 508 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 TMEM168Q9H0V1 697 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 SUDS3Q9H7L9 328 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 ETNK1Q9HBU6 452 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 RAB6BQ9NRW1 208 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 TRNAU1APQ9NX07 287 aaKnown RBP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 VPS18Q9P253 973 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 SUFUQ9UMX1 484 aa14.95□□□□□ -0.02
CXCL12-207ENST00000488591 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.95□□□□□ -0.02
CXCL12-207ENST00000488591 LRP4O75096 1905 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms