RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 BRF2Q9HAW0 419 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 IRAK4Q9NWZ3 460 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 C9orf78Q9NZ63 289 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-214ENST00000488427 HSPB7Q9UBY9 170 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 SLCO3A1Q9UIG8 710 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 CDC14AQ9UNH5 594 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 ARHGEF10O15013 1369 aa4.4□□□□□ -1.71
ITGB1-214ENST00000488427 COL6A3P12111 3177 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 CCDC88AQ3V6T2 1871 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 ATP7BP35670 1465 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 HSPA12AO43301 675 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 SEC14L5O43304 696 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 ZIC3O60481 467 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 TNFRSF8P28908 595 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 HNRNPH1P31943 449 aaKnown RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 CDAP32320 146 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 RRP1P56182 461 aaKnown RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 RPL7AP62424 266 aaKnown RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 KIF5AQ12840 1032 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 TNFAIP1Q13829 316 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 DPCR1Q3MIW9 517 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 SLC9B1Q4ZJI4 515 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 C6orf141Q5SZD1 244 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 GGNBP1Q5YKI7 109 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 CCNI2Q6ZMN8 369 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 CADM4Q8NFZ8 388 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 ZUFSPQ96AP4 578 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 POLR3GLQ9BT43 218 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 TTYH1Q9H313 450 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 ASAH2Q9NR71 780 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 HAO1Q9UJM8 370 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 FBXO9Q9UK97 447 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-214ENST00000488427 RCOR1Q9UKL0 485 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 CAMK2AQ9UQM7 478 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 PKD1L2Q7Z442 2459 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 SZT2Q5T011 3432 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 BTAF1O14981 1849 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 ARFGEF1Q9Y6D6 1849 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 IQGAP3Q86VI3 1631 aa4.39□□□□□ -1.71
ITGB1-214ENST00000488427 N4BP2Q86UW6 1770 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-214ENST00000488427 MEGF6O75095 1541 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 A0A1W2PPH5 198 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 A0A1W2PRG0 241 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 hDV102S1A0JD36 115 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 TMEM202A6NGA9 273 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 PRSS44E7EML9 344 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 KLK8O60259 260 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 SRCP12931 536 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 PSMA4P25789 261 aaKnown RBP4.38□□□□□ -1.71
ITGB1-214ENST00000488427 SNTA1Q13424 505 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 CTF1Q16619 201 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 USP41Q3LFD5 358 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 CDC73Q6P1J9 531 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 KCTD18Q6PI47 426 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-214ENST00000488427 SPSB3Q6PJ21 355 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 C18orf65Q6ZTR6 163 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 EXOC3L1Q86VI1 746 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 HEATR4Q86WZ0 1026 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 PCYOX1LQ8NBM8 494 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 ETNPPLQ8TBG4 499 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 RFFLQ8WZ73 363 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 SLC25A18Q9H1K4 315 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 SMARCAL1Q9NZC9 954 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 CTNNAL1Q9UBT7 734 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 TTC7AQ9ULT0 858 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-214ENST00000488427 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 PHRF1Q9P1Y6 1649 aaKnown RBP4.38□□□□□ -1.71
ITGB1-214ENST00000488427 NHSQ6T4R5 1651 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 KANK1Q14678 1352 aa4.38□□□□□ -1.71
ITGB1-214ENST00000488427 LAMB4A4D0S4 1761 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 BRCA1P38398 1863 aaKnown RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 MAGEA13PA6NCF6 341 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 NPIPB11E5RHQ5 1161 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 TNFSF14O43557 240 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 TMEM63AO94886 807 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 AGR2O95994 175 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 KRT10P13645 584 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 PIGAP37287 484 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 IL15P40933 162 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 CXCR3P49682 368 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 CASP6P55212 293 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 MAP2K1Q02750 393 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 MYBPHQ13203 477 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 DCTN2Q13561 401 aaKnown RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 DRAP1Q14919 205 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 KLHL22Q53GT1 634 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 SLC9C2Q5TAH2 1124 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 PLEKHA7Q6IQ23 1121 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 LRRC8EQ6NSJ5 796 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 CACNA2D4Q7Z3S7 1137 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 TDRPQ86YL5 185 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 ZBTB2Q8N680 514 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 PPHLN1Q8NEY8 458 aaKnown RBP4.37□□□□□ -1.71
ITGB1-214ENST00000488427 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 ERGIC1Q969X5 290 aa4.37□□□□□ -1.71
ITGB1-214ENST00000488427 RRP36Q96EU6 259 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms