RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 ZNF75CPQ92670 426 aaPredicted RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 VOPP1Q96AW1 172 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 GRAMD1AQ96CP6 724 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 TSPAN17Q96FV3 270 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 ELMO2Q96JJ3 720 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 TCF12Q99081 682 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 GPR63Q9BZJ6 419 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 CIPCQ9C0C6 399 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 CHRDQ9H2X0 955 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 SUV39H2Q9H5I1 410 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 INTS10Q9NVR2 710 aaKnown RBP12.69□□□□□ -0.38
NELFE-209ENST00000488426 IL17CQ9P0M4 197 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 DEC1Q9P2X7 70 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 PPIL1Q9Y3C6 166 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 SCN8AQ9UQD0 1980 aa12.69□□□□□ -0.38
NELFE-209ENST00000488426 KLF11O14901 512 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 TRIM24O15164 1050 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 LAMTOR5O43504 91 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 PLIN3O60664 434 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 GKP32189 559 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 STC1P52823 247 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 SLC12A2P55011 1212 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 SATB1Q01826 763 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 DMWDQ09019 674 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ITPRIPL2Q3MIP1 535 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 GRAMD4Q6IC98 578 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 RAPH1Q70E73 1250 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 SLC41A1Q8IVJ1 513 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 GPATCH11Q8N954 259 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 KDM1BQ8NB78 822 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ACVR1CQ8NER5 493 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 OR2A12Q8NGT7 310 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 EZH1Q92800 747 aaPredicted RBP12.68□□□□□ -0.38
NELFE-209ENST00000488426 TSNARE1Q96NA8 513 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 SMIM14Q96QK8 99 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 MANSC1Q9H8J5 431 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 FGFR1OP2Q9NVK5 253 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 EMCNQ9ULC0 261 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 MRPS17Q9Y2R5 130 aaKnown RBP12.68□□□□□ -0.38
NELFE-209ENST00000488426 MUC22E2RYF6 1773 aaPredicted RBP12.68□□□□□ -0.38
NELFE-209ENST00000488426 A0A087X1B8 175 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 PFDN6O15212 129 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 SLC4A1P02730 911 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 PROCP04070 461 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 APOA4P06727 396 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ALPIP09923 528 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 TDGF1P13385 188 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 CTPS1P17812 591 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ST8SIA6P61647 398 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 CCINQ13939 588 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
NELFE-209ENST00000488426 FAM45BPQ6NSW5 357 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 GDPD4Q6W3E5 623 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 USP45Q70EL2 814 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 LYSMD3Q7Z3D4 306 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 PIGWQ7Z7B1 504 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
NELFE-209ENST00000488426 FAM45AQ8TCE6 357 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 CYB5D2Q8WUJ1 264 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 LRIG1Q96JA1 1093 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 OMDQ99983 421 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 HEPHQ9BQS7 1158 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 C8orf33Q9H7E9 229 aaPredicted RBP12.68□□□□□ -0.38
NELFE-209ENST00000488426 ZFYVE1Q9HBF4 777 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ELOVL2Q9NXB9 296 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 SIRPGQ9P1W8 387 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 MID2Q9UJV3 735 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 ACOT9Q9Y305 439 aa12.68□□□□□ -0.38
NELFE-209ENST00000488426 WDR91A4D1P6 747 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 BNIP3LO60238 219 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 EDF1O60869 148 aaKnown RBP12.67□□□□□ -0.38
NELFE-209ENST00000488426 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
NELFE-209ENST00000488426 BPGMP07738 259 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 SLC35E2BP0CK96 405 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 NEFHP12036 1026 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 PMLP29590 882 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 MC4RP32245 332 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 HNF1BP35680 557 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 GALK1P51570 392 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 TAS2R39P59534 338 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 POLR2LP62875 67 aaKnown RBP12.67□□□□□ -0.38
NELFE-209ENST00000488426 PTPRNQ16849 979 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 ZNF789Q5FWF6 425 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 AARS2Q5JTZ9 985 aaKnown RBP12.67□□□□□ -0.38
NELFE-209ENST00000488426 BRAT1Q6PJG6 821 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
NELFE-209ENST00000488426 CACNA2D3Q8IZS8 1091 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 SORCS1Q8WY21 1168 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 SCRN2Q96FV2 425 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 MCCC1Q96RQ3 725 aaPredicted RBP12.67□□□□□ -0.38
NELFE-209ENST00000488426 OSBPL1AQ9BXW6 950 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 TMEM216Q9P0N5 145 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms