RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 FAM83DQ9H4H8 585 aa23.56■■□□□ 1.36
RHBDD3-205ENST00000488106 SUFUQ9UMX1 484 aa23.56■■□□□ 1.36
RHBDD3-205ENST00000488106 LOC285095A0A1B0GVY8 99 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 CPED1A4D0V7 1026 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 FADS2P1A8MWK0 482 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 AURKAO14965 403 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 ANXA9O76027 345 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 GNPDA1P46926 289 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 DUSP3P51452 185 aaPredicted RBP23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 GEMP55040 296 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 ILKQ13418 452 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 NR0B2Q15466 257 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 SMAD1Q15797 465 aaKnown RBP23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 GUSBP11Q6P575 273 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 TAF8Q7Z7C8 310 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 SLC35F3Q8IY50 421 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 RAVER1Q8IY67 606 aaKnown RBP23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 FAM71DQ8N9W8 422 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 KYQ8NBH2 561 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 IFI44Q8TCB0 444 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 SCG3Q8WXD2 468 aaKnown RBP23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 ATG4AQ8WYN0 398 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 USP29Q9HBJ7 922 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 TMEM98Q9Y2Y6 226 aa23.55■■□□□ 1.36
RHBDD3-205ENST00000488106 C1QTNF9BB2RNN3 333 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 C1QTNF9P0C862 333 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 SLC1A5Q15758 541 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 HES3Q5TGS1 186 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 UNQ6494/PRO21346Q6UXR6 183 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 EFL1Q7Z2Z2 1120 aaKnown RBP23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 TMC3Q7Z5M5 1100 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 CCL4L1Q8NHW4 92 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 GATA6Q92908 595 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 GLMNQ92990 594 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 SPATA16Q9BXB7 569 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 NCKIPSDQ9NZQ3 722 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 GULP1Q9UBP9 304 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 GPR34Q9UPC5 381 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 SLC17A4Q9Y2C5 497 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 ACACAQ13085 2346 aa23.54■■□□□ 1.36
RHBDD3-205ENST00000488106 RGSL1A5PLK6 1076 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 ZNF189O75820 626 aaPredicted RBP23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 ASMTLO95671 621 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 AGTP01019 485 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 FUCA1P04066 466 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 ATP1A1P05023 1023 aaKnown RBP23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 FGF1P05230 155 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 CDK4P11802 303 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 HLA-DPA1P20036 260 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 OLIG2Q13516 323 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 PRPSAP1Q14558 356 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 ARHGEF18Q6ZSZ5 1173 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 MARK2Q7KZI7 788 aaKnown RBP23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 NLRP8Q86W28 1048 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 SLC13A5Q86YT5 568 aaPredicted RBP23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 GPR26Q8NDV2 337 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 TRIM58Q8NG06 486 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 SLC35B2Q8TB61 432 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 BLOC1S5Q8TDH9 187 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 SRPK1Q96SB4 655 aaKnown RBP23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 APOL2Q9BQE5 337 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 TMEM121Q9BTD3 319 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 BPIFA1Q9NP55 256 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 PIKFYVEQ9Y2I7 2098 aa23.53■■□□□ 1.36
RHBDD3-205ENST00000488106 FAM221BA6H8Z2 402 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 EPOP01588 193 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 RPIAP49247 311 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 GDF10P55107 478 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 ZNF569Q5MCW4 686 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 LVRNQ6Q4G3 990 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 CCNI2Q6ZMN8 369 aaPredicted RBP23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 SDR16C5Q8N3Y7 309 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 UBE2Q2Q8WVN8 375 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 COX14Q96I36 57 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 TMEM121BQ9BXQ6 578 aaPredicted RBP23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 CARD9Q9H257 536 aa23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 OAS3Q9Y6K5 1087 aaKnown RBP23.52■■□□□ 1.36
RHBDD3-205ENST00000488106 ANKRD11Q6UB99 2663 aaPredicted RBP23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 B4DGG1 531 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 IVLP07476 585 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 BPIP17213 487 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 DCDC1P59894 354 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 INSM1Q01101 510 aaPredicted RBP23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 GLT6D1Q7Z4J2 308 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 TMPRSS12Q86WS5 348 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 ARL10Q8N8L6 244 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 FAM46DQ8NEK8 389 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 TRABDQ9H4I3 376 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 ARFGAP3Q9NP61 516 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 RAD18Q9NS91 495 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 CNOT6Q9ULM6 557 aaKnown RBP23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 AAR2Q9Y312 384 aaKnown RBP23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 GPSM3Q9Y4H4 160 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 DMXL2Q8TDJ6 3036 aa23.51■■□□□ 1.35
RHBDD3-205ENST00000488106 C5orf60A6NFR6 353 aa23.5■■□□□ 1.35
RHBDD3-205ENST00000488106 GP1BAP07359 652 aa23.5■■□□□ 1.35
RHBDD3-205ENST00000488106 JUPP14923 745 aa23.5■■□□□ 1.35
RHBDD3-205ENST00000488106 AK4P27144 223 aaPredicted RBP23.5■■□□□ 1.35
RHBDD3-205ENST00000488106 E2F1Q01094 437 aa23.5■■□□□ 1.35
RHBDD3-205ENST00000488106 ILF3Q12906 894 aaKnown RBP eCLIP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms