RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GJC1P36383 396 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 ACTR1BP42025 376 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 EPHB1P54762 984 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 ACTR1AP61163 376 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 TPM4P67936 248 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 GBE1Q04446 702 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 SQSTM1Q13501 440 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 PDK2Q15119 407 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 CLPPQ16740 277 aaPredicted RBP12.13□□□□□ -0.47
VPS16-208ENST00000487461 TIGD7Q6NT04 549 aaPredicted RBP12.13□□□□□ -0.47
VPS16-208ENST00000487461 ZNF765Q7L2R6 523 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 VASH2Q86V25 355 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 DTX1Q86Y01 620 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 NRSN1Q8IZ57 195 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 IQCDQ96DY2 449 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 SGF29Q96ES7 293 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 COX14Q96I36 57 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 CCDC74BQ96LY2 380 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 OR2M4Q96R27 311 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 WDR24Q96S15 920 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
VPS16-208ENST00000487461 B3GNT4Q9C0J1 378 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 SEPT10Q9P0V9 454 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 CNOT6Q9ULM6 557 aaKnown RBP12.13□□□□□ -0.47
VPS16-208ENST00000487461 PCYT1BQ9Y5K3 369 aaPredicted RBP12.13□□□□□ -0.47
VPS16-208ENST00000487461 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
VPS16-208ENST00000487461 IGHV1OR21-1A0A087WYE8 117 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 J3QKU1 62 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 ZW10O43264 779 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 EML2O95834 649 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 HLA-DQB2P05538 268 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 FGF3P11487 239 aaPredicted RBP12.12□□□□□ -0.47
VPS16-208ENST00000487461 MPSTP25325 297 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 CASP14P31944 242 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 ARSDP51689 593 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 LIMK2P53671 638 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 BIRC2Q13490 618 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 PEX6Q13608 980 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 MANEAQ5SRI9 462 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 LPCAT1Q8NF37 534 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 RAPGEF5Q92565 580 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 EXTL1Q92935 676 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 PMEPA1Q969W9 287 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 FAF2Q96CS3 445 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 ZNF670Q9BS34 389 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 PACSIN1Q9BY11 444 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 CDH19Q9H159 772 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 AKAP7Q9P0M2 348 aaPredicted RBP12.12□□□□□ -0.47
VPS16-208ENST00000487461 TMEM9Q9P0T7 183 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 IFNKQ9P0W0 207 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 AMACRQ9UHK6 382 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 ZNHIT2Q9UHR6 403 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 PRKAB1Q9Y478 270 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 TTLL3Q9Y4R7 772 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 PCDHB11Q9Y5F2 797 aa12.12□□□□□ -0.47
VPS16-208ENST00000487461 OAS3Q9Y6K5 1087 aaKnown RBP12.12□□□□□ -0.47
VPS16-208ENST00000487461 ASH1LQ9NR48 2969 aaKnown RBP12.12□□□□□ -0.47
VPS16-208ENST00000487461 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
VPS16-208ENST00000487461 DNAJC6O75061 913 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 ASMTLO95671 621 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 JCHAINP01591 159 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 ATP1A1P05023 1023 aaKnown RBP12.11□□□□□ -0.47
VPS16-208ENST00000487461 PYGLP06737 847 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 MMP2P08253 660 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 H2AFZP0C0S5 128 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 KDELR1P24390 212 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 CD82P27701 267 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 HNRNPH3P31942 346 aaKnown RBP12.11□□□□□ -0.47
VPS16-208ENST00000487461 CSF2RBP32927 897 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
VPS16-208ENST00000487461 TRA2AQ13595 282 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPS16-208ENST00000487461 QPCTQ16769 361 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 TMEM164Q5U3C3 297 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 H2AFVQ71UI9 128 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 ZNF761Q86XN6 746 aaPredicted RBP12.11□□□□□ -0.47
VPS16-208ENST00000487461 GALNT13Q8IUC8 556 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 CNTD1Q8N815 330 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 CCNYQ8ND76 341 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 OR4D9Q8NGE8 314 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 TAAR9Q96RI9 348 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 LYSMD1Q96S90 227 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 UVRAGQ9P2Y5 699 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
VPS16-208ENST00000487461 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
VPS16-208ENST00000487461 FADS2P1A8MWK0 482 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
VPS16-208ENST00000487461 GOLGA6L19H0YKK7 550 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 KRT7P08729 469 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 THRAP10827 490 aa12.1□□□□□ -0.47
VPS16-208ENST00000487461 MX2P20592 715 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms