RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 HIF1AQ16665 826 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 TSTD2Q5T7W7 516 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 DOK6Q6PKX4 331 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 TRIM74Q86UV6 250 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 MPP5Q8N3R9 675 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 TRAM1L1Q8N609 369 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 LRRN4CLQ8ND94 238 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 STYXQ8WUJ0 223 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 FUBP1Q96AE4 644 aaKnown RBP12.69□□□□□ -0.38
PRDM2-208ENST00000487453 FRMD8Q9BZ67 464 aaPredicted RBP12.69□□□□□ -0.38
PRDM2-208ENST00000487453 CAPN10Q9HC96 672 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 IL26Q9NPH9 171 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 PHPT1Q9NRX4 125 aaPredicted RBP12.69□□□□□ -0.38
PRDM2-208ENST00000487453 NLE1Q9NVX2 485 aaPredicted RBP12.69□□□□□ -0.38
PRDM2-208ENST00000487453 WHRNQ9P202 907 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 APPL1Q9UKG1 709 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 TMEM131Q92545 1883 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 BPTFQ12830 3046 aa12.69□□□□□ -0.38
PRDM2-208ENST00000487453 USP34Q70CQ2 3546 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 MROH6A6NGR9 719 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 TOR1BO14657 336 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 LRP3O75074 770 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 BANF1O75531 89 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 KELP23276 732 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 MC4RP32245 332 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 ARL4CP56559 192 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PRAMEP78395 509 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 CDK3Q00526 305 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 ITGA9Q13797 1035 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 CHRNA6Q15825 494 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 CSRP2Q16527 193 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 KIF19Q2TAC6 998 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 BBS9Q3SYG4 887 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 AASDHQ4L235 1098 aaPredicted RBP12.68□□□□□ -0.38
PRDM2-208ENST00000487453 ATP13A5Q4VNC0 1218 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 GLE1Q53GS7 698 aaKnown RBP12.68□□□□□ -0.38
PRDM2-208ENST00000487453 DNAJC21Q5F1R6 531 aaKnown RBP12.68□□□□□ -0.38
PRDM2-208ENST00000487453 TEX35Q5T0J7 233 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 ADAMTSL4Q6UY14 1074 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 MACC1Q6ZN28 852 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 NLRP9Q7RTR0 991 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PARGQ86W56 976 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 DCP2Q8IU60 420 aaKnown RBP12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PDIK1LQ8N165 341 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 GDAP1Q8TB36 358 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PTCD2Q8WV60 388 aaKnown RBP12.68□□□□□ -0.38
PRDM2-208ENST00000487453 HIC2Q96JB3 615 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 ZNF778Q96MU6 729 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PWWP2AQ96N64 755 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 EDEM2Q9BV94 578 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 LGR4Q9BXB1 951 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 SUDS3Q9H7L9 328 aaPredicted RBP12.68□□□□□ -0.38
PRDM2-208ENST00000487453 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 PARD6AQ9NPB6 346 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 GRHL1Q9NZI5 618 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 SLC2A6Q9UGQ3 507 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 MOSPD1Q9UJG1 213 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 SOX13Q9UN79 622 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 SLC30A1Q9Y6M5 507 aa12.68□□□□□ -0.38
PRDM2-208ENST00000487453 SPTY2D1-AS1A0A0U1RR47 76 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 SDR42E2A6NKP2 422 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
PRDM2-208ENST00000487453 SLC25A14O95258 325 aaPredicted RBP12.67□□□□□ -0.38
PRDM2-208ENST00000487453 ASMTLO95671 621 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 CER1O95813 267 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 RHOXF2BP0C7M4 288 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 ITGALP20701 1170 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 NMBRP28336 390 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 TEAD1P28347 426 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 TRIM23P36406 574 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 CTSKP43235 329 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 MAGEA3P43357 314 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 PLTPP55058 493 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 KIAA1024LP59773 190 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 BNC1Q01954 994 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
PRDM2-208ENST00000487453 SMAD1Q15797 465 aaKnown RBP12.67□□□□□ -0.38
PRDM2-208ENST00000487453 ZRANB3Q5FWF4 1079 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 TPRG1LQ5T0D9 272 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 FNBP1LQ5T0N5 605 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 PDPK2PQ6A1A2 396 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 ENPP7Q6UWV6 458 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 CES3Q6UWW8 571 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 NLRP8Q86W28 1048 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
PRDM2-208ENST00000487453 OR13J1Q8NGT2 312 aa12.67□□□□□ -0.38
PRDM2-208ENST00000487453 OR2I1PQ8NGU4 316 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms