RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 PPM1FP49593 454 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-215ENST00000487401 MAPK10P53779 464 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 CFHR1Q03591 330 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 SLC10A2Q12908 348 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-215ENST00000487401 IHHQ14623 411 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 ZNF438Q7Z4V0 828 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 RAVER1Q8IY67 606 aaKnown RBP12.38□□□□□ -0.43
SREBF1-215ENST00000487401 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 WBP1Q96G27 269 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 CCNL2Q96S94 520 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-215ENST00000487401 AGAP2Q99490 1192 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 MLPHQ9BV36 600 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-215ENST00000487401 SEMA6CQ9H3T2 930 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 FAM83DQ9H4H8 585 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 RDH14Q9HBH5 336 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 ZNHIT2Q9UHR6 403 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 PCDHB11Q9Y5F2 797 aa12.38□□□□□ -0.43
SREBF1-215ENST00000487401 RGSL1A5PLK6 1076 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 K7ENP7 123 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 APOL1O14791 398 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 CD1CP29017 333 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 PPIDQ08752 370 aaKnown RBP12.37□□□□□ -0.43
SREBF1-215ENST00000487401 AP1B1Q10567 949 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 LRP8Q14114 963 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 PDK1Q15118 436 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 QPCTQ16769 361 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 PYCR3Q53H96 274 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 TMEM164Q5U3C3 297 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-215ENST00000487401 RFX6Q8HWS3 928 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 SLITRK4Q8IW52 837 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 RHOT2Q8IXI1 618 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 SNRNP27Q8WVK2 155 aaKnown RBP12.37□□□□□ -0.43
SREBF1-215ENST00000487401 PATE1Q8WXA2 126 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 USP7Q93009 1102 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 COX14Q96I36 57 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 LYSMD1Q96S90 227 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 NUDT22Q9BRQ3 303 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 ZMYND15Q9H091 742 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 TSPY26PQ9H489 355 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 NHEJ1Q9H9Q4 299 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-215ENST00000487401 ABHD10Q9NUJ1 306 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 SEPT10Q9P0V9 454 aa12.37□□□□□ -0.43
SREBF1-215ENST00000487401 DOCK9Q9BZ29 2069 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 CHD5Q8TDI0 1954 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 TRBV23OR9-2A0A075B6M9 112 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 ZNF487B1APH4 448 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 ANKRD66B4E2M5 251 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
SREBF1-215ENST00000487401 PPM1DO15297 605 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 KRT1P04264 644 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 TNNT1P13805 278 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 ITIH1P19827 911 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 SPINT3P49223 89 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 IFI35P80217 286 aaPredicted RBP12.36□□□□□ -0.43
SREBF1-215ENST00000487401 NR1D2Q14995 579 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 NKAIN2Q5VXU1 208 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 PCSK4Q6UW60 755 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 TMPRSS9Q7Z410 1059 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 NAGSQ8N159 534 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 AHCYL2Q96HN2 611 aaKnown RBP12.36□□□□□ -0.43
SREBF1-215ENST00000487401 SLC38A3Q99624 504 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 CHP1Q99653 195 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 DPYSL5Q9BPU6 564 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 BRD8Q9H0E9 1235 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 SPTLC3Q9NUV7 552 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 KCNK4Q9NYG8 393 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 VPS18Q9P253 973 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 ACSL6Q9UKU0 697 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 ST14Q9Y5Y6 855 aa12.36□□□□□ -0.43
SREBF1-215ENST00000487401 PRAMEF33A0A0G2JMD5 474 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 IGHV5-10-1A0A0J9YXX1 117 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 HGSO14964 777 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 PRAMEF10O60809 474 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 C1QL1O75973 258 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 MMP2P08253 660 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 LIPCP11150 499 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ETV5P41161 510 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 SLC1A1P43005 524 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ZBTB17Q13105 803 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 TRA2AQ13595 282 aaKnown RBP eCLIP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 GALNT3Q14435 633 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 C16orf72Q14CZ0 275 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 TGIF1Q15583 401 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 KIAA1614Q5VZ46 1190 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ZNF574Q6ZN55 896 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 CHST15Q7LFX5 561 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 KDELC2Q7Z4H8 507 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ZNF605Q86T29 641 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ZFAND4Q86XD8 727 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms