RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GLI1P08151 1106 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 KRT13P13646 458 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 FOSL1P15407 271 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 ACVRL1P37023 503 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GNPDA1P46926 289 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GLRBP48167 497 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GEMIN4P57678 1058 aaKnown RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GSDMDP57764 484 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 OTUD1Q5VV17 481 aaPredicted RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 LYPLAL1Q5VWZ2 237 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 IZUMO3Q5VZ72 239 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 DUS1LQ6P1R4 473 aaKnown RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 TMEM270Q6UE05 265 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 PLXDC1Q8IUK5 500 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 LRRC8AQ8IWT6 810 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GUF1Q8N442 669 aaKnown RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GRHL3Q8TE85 626 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 FAR1Q8WVX9 515 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 CCDC120Q96HB5 630 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 GDAP1L1Q96MZ0 367 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 AGAP3Q96P47 875 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 FCRL4Q96PJ5 515 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 TEX101Q9BY14 249 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 SLC17A4Q9Y2C5 497 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 NEU2Q9Y3R4 380 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 SNX10Q9Y5X0 201 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 CACNA1CQ13936 2221 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 ABCA4P78363 2273 aa11.58□□□□□ -0.55
TRIM56-204ENST00000487252 NCOA6Q14686 2063 aaPredicted RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 F5H423 210 aaPredicted RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 C19orf84I3L1E1 186 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 SMC2O95347 1197 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 CALCAP01258 141 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 IVLP07476 585 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 NR2F2P24468 414 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 ERCC5P28715 1186 aaPredicted RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 PSMC2P35998 433 aaKnown RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 ACTR1BP42025 376 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 CXCR3P49682 368 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 ACTR1AP61163 376 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 HHEXQ03014 270 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 TLE4Q04727 773 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 LTBQ06643 244 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 LRMPQ12912 555 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 RALGDSQ12967 914 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 CUL4BQ13620 913 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 PPP1R3BQ86XI6 285 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 C17orf53Q8N3J3 647 aaPredicted RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 ARFGAP1Q8N6T3 406 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 IQUBQ8NA54 791 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 ENOX1Q8TC92 643 aaKnown RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 DHX58Q96C10 678 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 CCDC34Q96HJ3 373 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 XPO4Q9C0E2 1151 aaKnown RBP11.58□□□□□ -0.56
TRIM56-204ENST00000487252 TKTL2Q9H0I9 626 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 MAGEF1Q9HAY2 307 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 ASNSD1Q9NWL6 643 aa11.58□□□□□ -0.56
TRIM56-204ENST00000487252 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 CALUO43852 315 aaPredicted RBP11.57□□□□□ -0.56
TRIM56-204ENST00000487252 EML2O95834 649 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 TBXAS1P24557 533 aaPredicted RBP11.57□□□□□ -0.56
TRIM56-204ENST00000487252 KIR3DL1P43629 444 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 VAV2P52735 878 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 RRADP55042 308 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 GFERP55789 205 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 CCZ1BP86790 482 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 CCZ1P86791 482 aaPredicted RBP11.57□□□□□ -0.56
TRIM56-204ENST00000487252 FANCCQ00597 558 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 RAD51Q06609 339 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 NME3Q13232 169 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 RAPSNQ13702 412 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 LLGL1Q15334 1064 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 MEA1Q16626 185 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 CBWD6Q4V339 395 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 BRMS1LQ5PSV4 323 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 ACBD5Q5T8D3 534 aaPredicted RBP11.57□□□□□ -0.56
TRIM56-204ENST00000487252 ERAP2Q6P179 960 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 LRRC31Q6UY01 552 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 RPTNQ6XPR3 784 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 LIPIQ6XZB0 460 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 TAOK1Q7L7X3 1001 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 ELMO2Q96JJ3 720 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 SPOCK3Q9BQ16 436 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 PIGVQ9NUD9 493 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 OGFRQ9NZT2 677 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 ATP8A1Q9Y2Q0 1164 aa11.57□□□□□ -0.56
TRIM56-204ENST00000487252 A0A0U1RQS6 177 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 A0A1W2PQJ5 194 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 INSIG1O15503 277 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 TEX33O43247 280 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 HSF2BPO75031 334 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 XPAP23025 273 aaPredicted RBP11.56□□□□□ -0.56
TRIM56-204ENST00000487252 CA5AP35218 305 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms