RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TTC30BQ8N4P2 665 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 APOL2Q9BQE5 337 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 FRMD8Q9BZ67 464 aaPredicted RBP14.56□□□□□ -0.08
LIMS3-205ENST00000487150 ETNK1Q9HBU6 452 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 IL17CQ9P0M4 197 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 DOLKQ9UPQ8 538 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 SLC17A4Q9Y2C5 497 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 SPO11Q9Y5K1 396 aa14.56□□□□□ -0.08
LIMS3-205ENST00000487150 CEP250Q9BV73 2442 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 PLXNA2O75051 1894 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 GLYATL1P3A0A0U1RQE8 302 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 LMO7DNF2Z398 122 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 CCDC188H7C350 402 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 TNFSF14O43557 240 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 SDC3O75056 442 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 KCNK5O95279 499 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 SOD1P00441 154 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 CDK4P11802 303 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 BPIP17213 487 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 RPL22P35268 128 aaKnown RBP14.55□□□□□ -0.08
LIMS3-205ENST00000487150 PI4KAP42356 2102 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 RPIAP49247 311 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 ILF3Q12906 894 aaKnown RBP eCLIP14.55□□□□□ -0.08
LIMS3-205ENST00000487150 LRP8Q14114 963 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 PRRT3Q5FWE3 981 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 ALS2CLQ60I27 953 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 PSAPL1Q6NUJ1 521 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 ZCCHC8Q6NZY4 707 aaKnown RBP14.55□□□□□ -0.08
LIMS3-205ENST00000487150 NLRP9Q7RTR0 991 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 GKN2Q86XP6 184 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 GATAD2AQ86YP4 633 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 DEFB124Q8NES8 71 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 OR4C6Q8NH72 309 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 LMX1AQ8TE12 382 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 SLCO2A1Q92959 643 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 PEX13Q92968 403 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 PDXPQ96GD0 296 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 VPS35Q96QK1 796 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 SMIM14Q96QK8 99 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 LRRC61Q9BV99 259 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 FGF22Q9HCT0 170 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 SMOXQ9NWM0 555 aa14.55□□□□□ -0.08
LIMS3-205ENST00000487150 APOBEC2Q9Y235 224 aaKnown RBP14.55□□□□□ -0.08
LIMS3-205ENST00000487150 HEATR9A2RTY3 570 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 DCDC2BA2VCK2 349 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 NDC80O14777 642 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 ZNF185O15231 689 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 CBFA2T3O75081 653 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 USP12O75317 370 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 TRIM16O95361 564 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 ANXA6P08133 673 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 TPSB2P20231 275 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 KCNJ1P48048 391 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 DUSP3P51452 185 aaPredicted RBP14.54□□□□□ -0.08
LIMS3-205ENST00000487150 PPP1R7Q15435 360 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 TPSAB1Q15661 275 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 PRAMEF14Q5SWL7 426 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 TPRG1LQ5T0D9 272 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 FAM182AQ5T1J6 154 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 DENND5AQ6IQ26 1287 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 KANSL1Q7Z3B3 1105 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 GALNT13Q8IUC8 556 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 GPR26Q8NDV2 337 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 BAHD1Q8TBE0 780 aaPredicted RBP14.54□□□□□ -0.08
LIMS3-205ENST00000487150 GLYATL1Q969I3 302 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 ULK4Q96C45 1275 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 EID2BQ96D98 161 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 COX14Q96I36 57 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 GSDMCQ9BYG8 508 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 CARS2Q9HA77 564 aaKnown RBP14.54□□□□□ -0.08
LIMS3-205ENST00000487150 TRNAU1APQ9NX07 287 aaKnown RBP14.54□□□□□ -0.08
LIMS3-205ENST00000487150 MOSPD1Q9UJG1 213 aa14.54□□□□□ -0.08
LIMS3-205ENST00000487150 ANKRD36A6QL64 1941 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 A0A0U1RQS6 177 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 TMEM202A6NGA9 273 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 AURKAO14965 403 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 VEGFDO43915 354 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 SLC25A14O95258 325 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 PRAMEF1O95521 474 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 ASMTLO95671 621 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 LDOC1O95751 146 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 KRT14P02533 472 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 ITGALP20701 1170 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 MAGEA6P43360 314 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 ZNF140P52738 457 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 GPS1Q13098 491 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 GTF2H3Q13889 308 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 SEPT6Q14141 434 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 SPARCL1Q14515 664 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 TRIP6Q15654 476 aaKnown RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 SKIDA1Q1XH10 827 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 ZNF542PQ5EBM4 170 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 LDLRAP1Q5SW96 308 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 RFLNAQ6ZTI6 216 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 CREG2Q8IUH2 290 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 TAB3Q8N5C8 712 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 FAM181AQ8N9Y4 354 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 STYXQ8WUJ0 223 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms