RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MUC22E2RYF6 1773 aaPredicted RBP7.03□□□□□ -1.28
SF3A3-206ENST00000487062 MYO9BQ13459 2157 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GLYATL1P3A0A0U1RQE8 302 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TSPAN11A1L157 253 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TBC1D3BA6NDS4 549 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 UPK3BL1B0FP48 263 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 UPK3BL2E5RIL1 263 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TRIM24O15164 1050 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 VPS26AO75436 327 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 LEFTY1O75610 366 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 RHOBTB1O94844 696 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TGDSO95455 350 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CLDN7O95471 211 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TOP3BO95985 862 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PRNPP04156 253 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 APODP05090 189 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SERPINE1P05121 402 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 F7P08709 466 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 RBP1P09455 135 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 LTA4HP09960 611 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 MYL2P10916 166 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 RALBP11234 206 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PKMP14618 531 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CD9P21926 228 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 FDXRP22570 491 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GDI1P31150 447 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 VIPR1P32241 457 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GJA4P35212 333 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PTGER3P43115 390 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SLC6A11P48066 632 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 IRF9Q00978 393 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PEX6Q13608 980 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GRM2Q14416 872 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PCLAFQ15004 111 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PTPRNQ16849 979 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CTC1Q2NKJ3 1217 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 HNRNPA1L2Q32P51 320 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF805Q5CZA5 627 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF789Q5FWF6 425 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 LRRC8EQ6NSJ5 796 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 UGT3A1Q6NUS8 523 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CRTC1Q6UUV9 634 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 OTOAQ7RTW8 1153 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SNX20Q7Z614 316 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 DSG4Q86SJ6 1040 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 LDB1Q86U70 411 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CRLF3Q8IUI8 442 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CEP97Q8IW35 865 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PLD6Q8N2A8 252 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TERB1Q8NA31 727 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CHST14Q8NCH0 376 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ACVR1CQ8NER5 493 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GRIN3AQ8TCU5 1115 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF398Q8TD17 642 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CSGALNACT1Q8TDX6 532 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PPP4R1Q8TF05 950 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 KCTD4Q8WVF5 259 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SORCS1Q8WY21 1168 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 OR8D1Q8WZ84 308 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SUSD6Q92537 303 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 LPGAT1Q92604 370 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ULK4Q96C45 1275 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CCDC126Q96EE4 140 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PPP1R16AQ96I34 528 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SMIM14Q96QK8 99 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 MCCC1Q96RQ3 725 aaPredicted RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 NDNQ99608 321 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 MRPL57Q9BQC6 102 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 KXD1Q9BQD3 176 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 AARSD1Q9BTE6 412 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TRMT61BQ9BVS5 477 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 C1QTNF1Q9BXJ1 281 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TRIM55Q9BYV6 548 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 MRPL46Q9H2W6 279 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ASB8Q9H765 288 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 BRD9Q9H8M2 597 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 THAP1Q9NVV9 213 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ZNF358Q9NW07 568 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TAS2R13Q9NYV9 303 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 KLHL14Q9P2G3 628 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 DKK3Q9UBP4 350 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 SUN2Q9UH99 717 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CDH22Q9UJ99 828 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 CRLS1Q9UJA2 301 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 FNDC3AQ9Y2H6 1198 aaKnown RBP7.02□□□□□ -1.29
SF3A3-206ENST00000487062 ARL2BPQ9Y2Y0 163 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 GPSM3Q9Y4H4 160 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 PCDHB1Q9Y5F3 818 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 WASF2Q9Y6W5 498 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 COL4A3Q01955 1670 aa7.02□□□□□ -1.29
SF3A3-206ENST00000487062 TICRRQ7Z2Z1 1910 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 A0A1W2PPC1 479 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 RGSL1A5PLK6 1076 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 NPIPB15A6NHN6 443 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-206ENST00000487062 TMEM114B3SHH9 223 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 PRRT4C9JH25 899 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 E5RI56 91 aa7.01□□□□□ -1.29
SF3A3-206ENST00000487062 F8W8V4 182 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms